PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM77292.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 178aa MW: 21040.1 Da PI: 8.964 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.2 | 1.4e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEde+l ++k +G g+W+ +++ g++R++k+c++rw +yl OWM77292.1 13 RGAWSAEEDEILTYYIKSHGEGQWRDLPQRAGLKRCGKSCRLRWVNYL 60 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.4 | 5.2e-16 | 71 | 110 | 6 | 47 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +eE+el+++ +k+lG++ W++Ia++++ gRt++++k++w++ OWM77292.1 71 EEEEELILRMHKLLGNR-WALIAARLP-GRTDNEIKNYWNTN 110 8****************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MRRPCCAKEG LNRGAWSAEE DEILTYYIKS HGEGQWRDLP QRAGLKRCGK SCRLRWVNYL 60 RPYIKRGNIC EEEEELILRM HKLLGNRWAL IAARLPGRTD NEIKNYWNTN LRKRVRDRDR 120 QKFGMRTRWY PAEEFPCPPT GCARRFVVGG EHIDLNCEID FNALSSLLRE GCDEIFAY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 6e-59 | MYB family protein |