PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM76721.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 509aa MW: 55671.9 Da PI: 6.9581

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM76721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.8	2.2e-09	320	367	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq OWM76721.1 320 SHSLAERVRREKISQRMKVLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 367 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MESNSSNPIG MDVHSNGQLP NNCFFNPSWE NSISMDQTDP FESALSSIVS SPVASTMGPG 60 EGDHGMIKEL IGRLGVICNS GEISPQSYFE HRSSNNSTNT SAYTTPLNSP PKLSLSMMDH 120 QIRGNFWMPG TQFHPHSQQS FVPFSTDPGF AERAARSSCF GVRNFAGGLQ LNGSQRQAVT 180 AKKEKVLSRD GNSGFGDAGD SREGSSLSEQ IPGVEMNNMR AQNDANARKR KSAQRGKPKD 240 STLPPKDSEV AGENNQPSPK KIKSGEAAEN GSGKECDENA DKVSQGDKNQ KLGKDSKSKQ 300 PEPPKDYIHV RARRGQATDS HSLAERVRRE KISQRMKVLQ DLVPGCNKVT GKAVMLDEII 360 NYVQSLQCQV EFLSMKLATL NPRMDFNVEA FLSKDIFQSR GLLAHSDFPL DSSSAPTSHY 420 GFQPSHGMIS AMSEPEVQYP ENPLNAVIHR NRSNHLPPID GFPEASSQMS AMWEDDLQSV 480 VQMGIAQNHQ PLSFHGSAEP NHPQMKVKS

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MESNSSNPIG MDVHSNGQLP NNCFFNPSWE NSISMDQTDP FESALSSIVS SPVASTMGPG  60
EGDHGMIKEL IGRLGVICNS GEISPQSYFE HRSSNNSTNT SAYTTPLNSP PKLSLSMMDH  120
QIRGNFWMPG TQFHPHSQQS FVPFSTDPGF AERAARSSCF GVRNFAGGLQ LNGSQRQAVT  180
AKKEKVLSRD GNSGFGDAGD SREGSSLSEQ IPGVEMNNMR AQNDANARKR KSAQRGKPKD  240
STLPPKDSEV AGENNQPSPK KIKSGEAAEN GSGKECDENA DKVSQGDKNQ KLGKDSKSKQ  300
PEPPKDYIHV RARRGQATDS HSLAERVRRE KISQRMKVLQ DLVPGCNKVT GKAVMLDEII  360
NYVQSLQCQV EFLSMKLATL NPRMDFNVEA FLSKDIFQSR GLLAHSDFPL DSSSAPTSHY  420
GFQPSHGMIS AMSEPEVQYP ENPLNAVIHR NRSNHLPPID GFPEASSQMS AMWEDDLQSV  480
VQMGIAQNHQ PLSFHGSAEP NHPQMKVKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	263	RKRKSAQRGKPKDSTLPPKDSEVAGENNQPSPKKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	9e-81	bHLH family protein