PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM76409.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | GeBP | ||||||||
Protein Properties | Length: 238aa MW: 27060.7 Da PI: 11.1795 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 57.9 | 2.9e-18 | 76 | 164 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 fqr+wse e+ +++Gl++ ++ +p +++++ye +k++i + v+k+ l+ Ki +LKkKfk + kk+k+g e ++++++ + l+ k Wg OWM76409.1 76 FQRIWSEPEEMEVMKGLVEVSKN---KPEYELNDIYECIKQKIPSSVTKRRLSGKIWNLKKKFKSCDKKVKQGAE---LSPQEENFLVLAVKAWG 164 9******************9544...46889**************************************999998...56778889999999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MIRPLPLQKK IKRKTKKKKR KRIKRKNRRN NNSSLQALRP TERKKRSAEG IVSNGEAASK 60 RVKTKSNSKA QKKQFFQRIW SEPEEMEVMK GLVEVSKNKP EYELNDIYEC IKQKIPSSVT 120 KRRLSGKIWN LKKKFKSCDK KVKQGAELSP QEENFLVLAV KAWGSVENLV KGRIAAKKPV 180 KGKTAAARGL EGHEGTSVSA LSRRLLKGIE DVGGGWSLNE EFNAKNLKVL NLKEAENL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 8 | 26 | QKKIKRKTKKKKRKRIKRK |
2 | 9 | 17 | KKIKRKTKK |
3 | 12 | 26 | KRKTKKKKRKRIKRK |
4 | 13 | 21 | KKIKRKTKK |
5 | 16 | 21 | KKKKRK |
6 | 16 | 22 | KKKKRKR |
7 | 17 | 25 | KKIKRKTKK |
8 | 18 | 25 | KKRKRIKR |
9 | 21 | 29 | KKIKRKTKK |
10 | 24 | 46 | KRKNRRNNNSSLQALRPTERKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G11510.1 | 5e-09 | GeBP family protein |