PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76351.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 292aa    MW: 33882.4 Da    PI: 6.2651
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.15.2e-5171311128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 +ppGfrFhPtd+elv++yL +k++++++ +  +i+e+d+yk++Pw+Lp+++  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ +   + 
  OWM76351.1   7 MPPGFRFHPTDDELVNHYLIRKCASQSIAV-PIIAEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKSIGR--PKP 102
                 79*************************999.88***************7666789*************************************98..789 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                  g+kk Lvfy g+apkg+kt+W+mheyrl
  OWM76351.1 103 LGIKKALVFYAGKAPKGVKTNWIMHEYRL 131
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MKSQIEMPPG FRFHPTDDEL VNHYLIRKCA SQSIAVPIIA EIDLYKFDPW QLPEMALYGE  60
KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKSIGRP KPLGIKKALV FYAGKAPKGV  120
KTNWIMHEYR LANVDRSAGK KNNLRLDDWV LCRIYNKKGR IEKYSDVDEK PRTAGELQEM  180
QETEVKPDIS MFGRNMTNEQ FHYMDSSGSF PKLHTDSSCC SEHVLSPEFT CEKEVQSEPK  240
WNELDGALDF QFDSLDKFLE DVPFEPQVYQ FPAEQTQVSP LQDMFMYLQK PF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-128NAC family protein