PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM76243.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 273aa MW: 30945.5 Da PI: 9.2876

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM76243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.9	2.8e-51	14	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evd++k++PwdLp ++e yfFs+r+ ky++g+r+nrat sgyWkatg d++++++ OWM76243.1 14 LPPGFRFHPTDEELVVQYLKRKVYACPLPA-SIIPEVDVCKSDPWDLPGD---LDQERYFFSTREAKYPNGNRSNRATVSGYWKATGIDRQIVASrgin 108 79**************************.89***********54...46899*******************************998888 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+kktLvfy+g+ p+g+ktdW+mheyrl OWM76243.1 109 psQNQLVGMKKTLVFYRGKPPHGTKTDWIMHEYRL 143 888888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MDKLNFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVYACP LPASIIPEVD VCKSDPWDLP 60 GDLDQERYFF STREAKYPNG NRSNRATVSG YWKATGIDRQ IVASRGINPS QNQLVGMKKT 120 LVFYRGKPPH GTKTDWIMHE YRLVSPDANS PHRMNLNHSP ENWVLCRIFL KKRSSKNNDG 180 DDKNNGNIDV ASRVVGKSNT SSNSNNNNNN NNLMPVFYDF MGRNRNHKST DLNLAPDSSY 240 SGSSGVTELS SHECDDPEES SSCNSLPYFR RKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-96	NAC family protein