PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM76218.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

CAMTA

Protein Properties

Length: 934aa MW: 103867 Da PI: 5.4189

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM76218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	164.5	1.8e-51	23	137	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e ++rwlk+ e++ iL+n+e ++++e++++p+ gsl L+n+++ r+fr+DG++w+kkkd +tv E+he+LKvg+ve+l+cyYah+e+np+fqrr+yw OWM76218.1 23 REaQHRWLKPAEVLYILQNHEDDQIAQEPPQHPSGGSLYLFNKRVNRFFRRDGHNWRKKKDQRTVGEAHERLKVGNVETLNCYYAHGEQNPNFQRRSYW 121 5559********************************************************************************************* PP CG-1 101 lLeeelekivlvhyle 116 +L+ +e+ivlvhy++ OWM76218.1 122 MLDPVYEHIVLVHYRD 137 ************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 934 aa Download sequence
MVAPLTDPNS AIDLGYSMND LYREAQHRWL KPAEVLYILQ NHEDDQIAQE PPQHPSGGSL 60 YLFNKRVNRF FRRDGHNWRK KKDQRTVGEA HERLKVGNVE TLNCYYAHGE QNPNFQRRSY 120 WMLDPVYEHI VLVHYRDIAQ GKSSSGSIAS SSAFTPSPSP SPYSTQNPGS TSIISEVNES 180 GQNLSSPGSA EVSSNIVFKN NVVNGLGRVC REEFSSPHNF EVSKALKRIE EQLSLNDNTI 240 KELEPFIVED EHSNLTGFLD YETEIPTKGQ YENILDGPGY AVTYQFPNEH NGVQDNLSDY 300 ATLQDIDGTG GHAVGDEEGL WTEMLESYIP AHPSEVEIPE TSLEDYSHLF DQIPLGMLPE 360 SSSLTVAQVQ KYSIKDISPQ WSYSNEATKI IMVGSFLCDP SEFSWTCMFG DVEVPVEIVQ 420 EGVLCCEVPL RSPGKVTLCI TSANREACSE IREFEYRAKS NICSQCKSSP SEGPGSTEEV 480 LHLVRLVQML LSDSPMQQGD SSLSGISLPK SKTDDDSCSH IIEGLLDGSG TSSEAINGLL 540 QVLLKDKLRR WLSIRSQGND QGICSLSKKE QGIIHTVAAL GFEWTLNPIL SCGVGIDFRD 600 INGWTALHWA ARFGREKMVA ALIASGASAG AVTDPSACDP TGRTAASIAA SSGHNGLAGY 660 LSEVALTSHL SSLRLEESEL SRGSAEVEAE RTINSVTRDH ISINEDQLSL KDTLTAVRNA 720 AQAAARIQSA FRAHSFRKRQ EKEAAAGMHD DYGISLDDFH AMSKLSSRST RDYNSAALSI 780 QKKYRGWKGR KDFLALRQKV VKIQAHVRGY QVRKQYKVFC WAVGVLDKVV LRWRRKGAGL 840 RSLRHETEMS EESEDDEDIL KVFRKQKVDK AVEEAVSRVL SMVYSPDARQ QYRRVLERYR 900 QAKADLNDTA GEAAPSNSSY TVDMENEEYI NPFP

Sequence ? help Back to Top

Protein Sequence Length: 934 aa Download sequence

MVAPLTDPNS AIDLGYSMND LYREAQHRWL KPAEVLYILQ NHEDDQIAQE PPQHPSGGSL  60
YLFNKRVNRF FRRDGHNWRK KKDQRTVGEA HERLKVGNVE TLNCYYAHGE QNPNFQRRSY  120
WMLDPVYEHI VLVHYRDIAQ GKSSSGSIAS SSAFTPSPSP SPYSTQNPGS TSIISEVNES  180
GQNLSSPGSA EVSSNIVFKN NVVNGLGRVC REEFSSPHNF EVSKALKRIE EQLSLNDNTI  240
KELEPFIVED EHSNLTGFLD YETEIPTKGQ YENILDGPGY AVTYQFPNEH NGVQDNLSDY  300
ATLQDIDGTG GHAVGDEEGL WTEMLESYIP AHPSEVEIPE TSLEDYSHLF DQIPLGMLPE  360
SSSLTVAQVQ KYSIKDISPQ WSYSNEATKI IMVGSFLCDP SEFSWTCMFG DVEVPVEIVQ  420
EGVLCCEVPL RSPGKVTLCI TSANREACSE IREFEYRAKS NICSQCKSSP SEGPGSTEEV  480
LHLVRLVQML LSDSPMQQGD SSLSGISLPK SKTDDDSCSH IIEGLLDGSG TSSEAINGLL  540
QVLLKDKLRR WLSIRSQGND QGICSLSKKE QGIIHTVAAL GFEWTLNPIL SCGVGIDFRD  600
INGWTALHWA ARFGREKMVA ALIASGASAG AVTDPSACDP TGRTAASIAA SSGHNGLAGY  660
LSEVALTSHL SSLRLEESEL SRGSAEVEAE RTINSVTRDH ISINEDQLSL KDTLTAVRNA  720
AQAAARIQSA FRAHSFRKRQ EKEAAAGMHD DYGISLDDFH AMSKLSSRST RDYNSAALSI  780
QKKYRGWKGR KDFLALRQKV VKIQAHVRGY QVRKQYKVFC WAVGVLDKVV LRWRRKGAGL  840
RSLRHETEMS EESEDDEDIL KVFRKQKVDK AVEEAVSRVL SMVYSPDARQ QYRRVLERYR  900
QAKADLNDTA GEAAPSNSSY TVDMENEEYI NPFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein