PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75959.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 457aa MW: 51338.4 Da PI: 7.5842

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.8	2.9e-14	21	65	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W++eEd++l + + +G+++W+ Ia+++ +t qc+ rw++yl OWM75959.1 21 TWSQEEDDILREQISIHGTDNWTIIASRFK-DKTTRQCRRRWYTYL 65 6**************************9.***********97 PP
2	Myb_DNA-binding	45.7	1.5e-14	71	114	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd+ll +a + +G++ W+ Ia+ + gRt++ +k+r+ + OWM75959.1 71 KGGWSPEEDLLLCEAQRIYGNR-WTEIAKVVS-GRTDNAVKNRFTT 114 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MQRKANSGGE DSKKKERHIV TWSQEEDDIL REQISIHGTD NWTIIASRFK DKTTRQCRRR 60 WYTYLNSDFK KGGWSPEEDL LLCEAQRIYG NRWTEIAKVV SGRTDNAVKN RFTTLCKKRA 120 KLEALAKENS SSYINLNNKR VITHDPLYTT PTNAKRIRRA HILDAPESCN FVERLQGQPG 180 TTSDRQLRTP FAVLVQNIRN NLSISHHHIS HKGDIADSAL SNKGTFMKKD DPKVAALMQQ 240 AELLSSLAVQ VNLESTDQSF ENAWKVLQDF LNQRKEGNIL SNKIPETDFQ RDFKELLEDL 300 VKSSNEGSQG SWRQPDLREE SPTSSEYSTG STILAHTVND KNQQTLLPAE EGIPEGEEGI 360 FSTAITAPGT ESFQPCDAQV ERDGIVSASS FTEFGSPLQV TPLFRSLGAG IPSPKFSESE 420 RNFLMKTLGM DYSPSPALST NPSHPPPPCK RALLQSL

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MQRKANSGGE DSKKKERHIV TWSQEEDDIL REQISIHGTD NWTIIASRFK DKTTRQCRRR  60
WYTYLNSDFK KGGWSPEEDL LLCEAQRIYG NRWTEIAKVV SGRTDNAVKN RFTTLCKKRA  120
KLEALAKENS SSYINLNNKR VITHDPLYTT PTNAKRIRRA HILDAPESCN FVERLQGQPG  180
TTSDRQLRTP FAVLVQNIRN NLSISHHHIS HKGDIADSAL SNKGTFMKKD DPKVAALMQQ  240
AELLSSLAVQ VNLESTDQSF ENAWKVLQDF LNQRKEGNIL SNKIPETDFQ RDFKELLEDL  300
VKSSNEGSQG SWRQPDLREE SPTSSEYSTG STILAHTVND KNQQTLLPAE EGIPEGEEGI  360
FSTAITAPGT ESFQPCDAQV ERDGIVSASS FTEFGSPLQV TPLFRSLGAG IPSPKFSESE  420
RNFLMKTLGM DYSPSPALST NPSHPPPPCK RALLQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-155	MYB family protein