PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75934.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 349aa MW: 39384.4 Da PI: 6.6475

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75934.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.5e-32	21	75	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFveav +LGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl OWM75934.1 21 KPRLKWTPELHQRFVEAVCHLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 75 79****************************************************8 PP
2	Myb_DNA-binding	56.8	5e-18	23	74	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++v+av lGg t+k+ +r mg g+tl+++ks++qky+ OWM75934.1 23 RLKWTPELHQRFVEAVCHLGGAdkaTPKSLMRVMGiPGLTLYHLKSHLQKYR 74 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MGLQKMQNHQ SMNLVLSTDA KPRLKWTPEL HQRFVEAVCH LGGADKATPK SLMRVMGIPG 60 LTLYHLKSHL QKYRLGKSQQ SVESCAEDSS NNTNKKKQEV EEDKEIQSRD EHFALEVRDT 120 EAQANPINQN LQIAQALQLQ MEVQRKLHEQ IEVQKHLQLR IEAQGKYLHS VLKKAQETLA 180 GYCSSSPVSV ELAKAELSQL LSLVNSGPTS SSLSELTELG GPELSDVVNR QLKGMCSVES 240 SLTSSESSGR KEEDKQPKIE NRVTQEQSFT DSIELSLMNI HPSEVPRINN SRKRNCSMIP 300 HENDSSKLRK YEMPERLDLN RQYQNELDLD PKAIDLNCQG TEHCSSGQF

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MGLQKMQNHQ SMNLVLSTDA KPRLKWTPEL HQRFVEAVCH LGGADKATPK SLMRVMGIPG  60
LTLYHLKSHL QKYRLGKSQQ SVESCAEDSS NNTNKKKQEV EEDKEIQSRD EHFALEVRDT  120
EAQANPINQN LQIAQALQLQ MEVQRKLHEQ IEVQKHLQLR IEAQGKYLHS VLKKAQETLA  180
GYCSSSPVSV ELAKAELSQL LSLVNSGPTS SSLSELTELG GPELSDVVNR QLKGMCSVES  240
SLTSSESSGR KEEDKQPKIE NRVTQEQSFT DSIELSLMNI HPSEVPRINN SRKRNCSMIP  300
HENDSSKLRK YEMPERLDLN RQYQNELDLD PKAIDLNCQG TEHCSSGQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	5e-65	G2-like family protein