PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75933.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 373aa MW: 40721.4 Da PI: 8.3118

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.8	1e-37	105	165	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++++cprCds+ntkfCyynny+++qPr+fC++C+ryWt+GG++rnvPvG+grrk+k ss OWM75933.1 105 PDEKIPCPRCDSSNTKFCYYNNYNTNQPRHFCRGCQRYWTAGGTMRNVPVGSGRRKSKCSS 165 7899*****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MLAVLKNKEP ATAAIKLFGK TIKLPSNAVP DDRGSTPARD CVLDSDERPE GELIEGDKPS 60 EWETAENQLE VGASDLKDPT PTMPGKNSEN ETDESRTDQK LLKKPDEKIP CPRCDSSNTK 120 FCYYNNYNTN QPRHFCRGCQ RYWTAGGTMR NVPVGSGRRK SKCSSSSRCC PSIMFDASQI 180 PDCRNYGTIL SFSSGFPVPN LVKRAEGCLE NGIQSRGVNN GDDCSSVSSS VTTLSSSEKR 240 MGSKGIMDQK SNQGFQSQVP SFPVSHLRFP VSFYRGESDW GCAKLTLGKH SRDGKTTNSS 300 LSSMCTSSEE TGFKDRNNPK KGSAENLSSM NSKDPFRGFQ PNAAGVAYTP KMSLVLQTNP 360 AALSRSLDFQ ESS

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MLAVLKNKEP ATAAIKLFGK TIKLPSNAVP DDRGSTPARD CVLDSDERPE GELIEGDKPS  60
EWETAENQLE VGASDLKDPT PTMPGKNSEN ETDESRTDQK LLKKPDEKIP CPRCDSSNTK  120
FCYYNNYNTN QPRHFCRGCQ RYWTAGGTMR NVPVGSGRRK SKCSSSSRCC PSIMFDASQI  180
PDCRNYGTIL SFSSGFPVPN LVKRAEGCLE NGIQSRGVNN GDDCSSVSSS VTTLSSSEKR  240
MGSKGIMDQK SNQGFQSQVP SFPVSHLRFP VSFYRGESDW GCAKLTLGKH SRDGKTTNSS  300
LSSMCTSSEE TGFKDRNNPK KGSAENLSSM NSKDPFRGFQ PNAAGVAYTP KMSLVLQTNP  360
AALSRSLDFQ ESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69570.1	2e-32	Dof family protein