PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75797.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 383aa MW: 42003.3 Da PI: 8.2517

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.6	4.3e-31	224	279	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+e mkv+gLt+++vkSHLQk+Rl+ OWM75797.1 224 KQRRCWSPELHRRFLQALQQLGGSHAATPKQIREQMKVDGLTNDEVKSHLQKFRLH 279 79****************************************************97 PP
2	Myb_DNA-binding	42.5	1.5e-13	226	277	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qk++ OWM75797.1 226 RRCWSPELHRRFLQALQQLGGShaaTPKQIREQMKvDGLTNDEVKSHLQKFR 277 568***************99**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MRVDYTEEMQ SYIEALEEER RKILVFQREL PLCLELVTQA IGACKQQLSA TGVATECKNN 60 NGNGQSECSE QTSTEGTPVL EEFIPVKRPS KSEEDEDEQH SHKPMKIDDE SDGNKEKSSS 120 ADSKKKSDWL RSAQLWNQTP DPPPKEEHHQ PPRKVPVIEV TRNGGAFQPF HRDQKGSAKS 180 HQSSEKPHSP APTAATSSTT ETATGGKRVE KEGQSQTQTP TQRKQRRCWS PELHRRFLQA 240 LQQLGGSHAA TPKQIREQMK VDGLTNDEVK SHLQKFRLHT RRPSPAIHSS SSSQPPQFVV 300 VGGIWVPPPE YTAVAAPEAA KATSANGIYT PITASPPPAA KATDVNSKQN PKSEGRGSHS 360 SHSNSSPSST SSSSHTTTAS PLY

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MRVDYTEEMQ SYIEALEEER RKILVFQREL PLCLELVTQA IGACKQQLSA TGVATECKNN  60
NGNGQSECSE QTSTEGTPVL EEFIPVKRPS KSEEDEDEQH SHKPMKIDDE SDGNKEKSSS  120
ADSKKKSDWL RSAQLWNQTP DPPPKEEHHQ PPRKVPVIEV TRNGGAFQPF HRDQKGSAKS  180
HQSSEKPHSP APTAATSSTT ETATGGKRVE KEGQSQTQTP TQRKQRRCWS PELHRRFLQA  240
LQQLGGSHAA TPKQIREQMK VDGLTNDEVK SHLQKFRLHT RRPSPAIHSS SSSQPPQFVV  300
VGGIWVPPPE YTAVAAPEAA KATSANGIYT PITASPPPAA KATDVNSKQN PKSEGRGSHS  360
SHSNSSPSST SSSSHTTTAS PLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	5e-82	G2-like family protein