PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75723.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 353aa    MW: 38325.6 Da    PI: 10.2738
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.83.4e-1599144247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+  ++ + k+lG+g+W++I++++ +++t+ q+ s+ qky
       OWM75723.1  99 KPWTEEEHRTFLAGLKKLGKGNWRAISKKFVTTKTPTQVASHAQKY 144
                      58*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MVKDSAWKCS QCGGNGHNSR TCNSKSAGCS TIKLFGVTIA ETSHAPMKKS FSMDNLISSS  60
NLDTTTTHHF DVDEAGYLSD GPIHSSKRAK SSHARKRGKP WTEEEHRTFL AGLKKLGKGN  120
WRAISKKFVT TKTPTQVASH AQKYFLRQTS QDKKKRRSSL FDMRFEEPRP APQDLLCISP  180
SDEKPEIASK PQDIPSPSPS ALHPKVSTPA MSTKAQVMDK FPALCLDPQP LLPVAAPSGI  240
SFMMGIPGTL QGFPAARVYP STAYFPVTSF PGECTNRIPK VHGNFGTCSQ LLLAHPSGIP  300
SPRSNPSTVA SQRVARVSSL TEKDDIGLKL GQPRDPEKDQ LSSPTQAGTI RVN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153157KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.14e-53MYB_related family protein