PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75677.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 269aa MW: 30326.2 Da PI: 5.0718

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv+ + +G +W+++++ g++R++k+c++rw +yl OWM75677.1 14 KGPWTAEEDRKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.2	5.8e-16	70	111	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E++l +d+++ lG++ W++Ia++++ gRt++++k++w+++ OWM75677.1 70 LSEAEEKLVIDLHAALGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 5899*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDRKLVNFIL THGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL SEAEEKLVID LHAALGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLIRMG 120 IDPVTHEPLY KDDQVSPQDQ TVCRPDAEQV KLDVGTNGDF LLPALSCENS SNCSPTENSS 180 NDGCQSLDQS NDPDDPLMRY IWSEAFLDDS AWNFMQGTSS TDEFSICGLS SSEDNASWLL 240 SCKSFEEERF LVDCFVGDMD MNMLETGGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22680.1	5e-89	MYB family protein