PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM75154.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 34327.5 Da PI: 6.7432 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.9 | 5.4e-09 | 13 | 51 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ ++ +G g ++ R++k+c++rw +yl OWM75154.1 13 RGLWSPEEDEKLIRHITTHGHG-------SLQ--RCGKSCRLRWINYL 51 788*****************99.......566..************97 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 57 | 100 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E+ ++d+++ lG++ W+ Ia++++ gRt++++k++w++ OWM75154.1 57 RGSFTAQEERTIIDVHRILGNR-WSQIAKHLP-GRTDNEVKNFWNS 100 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MGHQCCSKQK VKRGLWSPEE DEKLIRHITT HGHGSLQRCG KSCRLRWINY LRPDLKRGSF 60 TAQEERTIID VHRILGNRWS QIAKHLPGRT DNEVKNFWNS CIKKKLIAQG LDPNTHNLLP 120 SHHQKKASSS SNSSNTSTFS LLHKQLSSVF QIDDGPREVK IPFVTLPSLS SYDSNTVADL 180 PPIQPYDYQK YLHMEQNPSI PISDSILSSS VIEESCIWNT SAEAPVSMGH DELQLQHYTD 240 NYREERISPE NKSTSEPNIN DHNIDAGMLS SSFDFEYMES IQVPCGMFCN LSDPMDQLTW 300 N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 5e-75 | MYB family protein |