PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75063.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ZF-HD
Protein Properties Length: 353aa    MW: 37404.9 Da    PI: 7.7542
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1024.1e-32104160259
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  ++vrY+eC++NhAas+Gg  +DGCgEfmp+ geegt++al+CaAC+CHRnFHRre++ 
   OWM75063.1 104 SSVRYRECRRNHAASVGGSILDGCGEFMPA-GEEGTIEALRCAACDCHRNFHRRETDA 160
                  579**************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MEASGGGGRG GDHRSRTEAL GLHNGAGAAL FGHPHHHQTL ADPTTDAVDR PNPNNNNTAT  60
NSSSSNPDPV SFAFAAASSP GPPSMTSPPS SAAPKSGKHQ PTSSSVRYRE CRRNHAASVG  120
GSILDGCGEF MPAGEEGTIE ALRCAACDCH RNFHRRETDA DPSPLASAGP GAYRRGAGMS  180
LATLQLSAPP PPPVIHHHHG HGGTTRPPPP YASLSIVPPM SVAFGGGGGT ESSSEDLNLF  240
GATTPTGHGH GHHHNLSSGG GYFGSSSSKS SKRFRTKFSQ EQKERMQEFA EKIGWRIQRP  300
CEDEVERFCA EVGVKRQVFK VWMHNNKNAT KSANKQQQTP TADHEVDHDR QED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.12e-29ZF-HD family protein