PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75024.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family SRS
Protein Properties Length: 335aa    MW: 35964.9 Da    PI: 5.1651
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702212.41.1e-651082644154
      DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...aeaaskrkrelkskkqsals...stklssaes 96 
                 g+++CqdCGnqakkdC h+RCRtCCksrg+ C+thvkstWv+a krrerqqqla+++ ++++++   + +++kr+r+++ ++ ++l    st++   ++
  OWM75024.1 108 GGMNCQDCGNQAKKDCPHMRCRTCCKSRGLTCETHVKSTWVSAGKRRERQQQLATMQIREQEEQqgfRIENPKRSRDQRPNNDNQLVlpaSTSI-IPTA 205
                 789**************************************************99988777776677777777777775555555431103333.3345 PP

      DUF702  97 kkeletsslPeevsseavfrcvrvssvddgeee.laYqtavsigGhvfkGiLydqGlee 154
                 +  +e++++P+e++s+a+frcvrvs +dd++ee +aYqta++igGhvfkGiLydqGl++
  OWM75024.1 206 TAGFEVAEFPNELNSSALFRCVRVSNMDDSNEEyYAYQTAMNIGGHVFKGILYDQGLDN 264
                 66899999*********************888769*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAGFFFLGGP LAKLPPPHEA AEAISRAGFE LSWPQHQQCY NNTANNNITD DNNNNNKLIS  60
SESDEGEIGS FTLGVGPPPD LVFDERLGVG LLTTTVAASM RGSGLGGGGM NCQDCGNQAK  120
KDCPHMRCRT CCKSRGLTCE THVKSTWVSA GKRRERQQQL ATMQIREQEE QQGFRIENPK  180
RSRDQRPNND NQLVLPASTS IIPTATAGFE VAEFPNELNS SALFRCVRVS NMDDSNEEYY  240
AYQTAMNIGG HVFKGILYDQ GLDNAYPVTG DSSAGGGSGA QPLNFITTTA TNSATAAAAA  300
TSNLNVNTLS DPSLVYPAPL NAFLAGTQFF PPPRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.16e-64SRS family protein