PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM74889.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB
Protein Properties Length: 301aa    MW: 34105 Da    PI: 4.7035
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM74889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.72.7e-131461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT +Ed +l + +   G ++W+t+++  g+ R++k+c++rw +yl
       OWM74889.1 14 RGPWTIDEDHKLMNFILNNGIHCWRTVPKLAGLLRCGKSCRLRWINYL 61
                     89******************************99************97 PP
2Myb_DNA-binding55.99.7e-1867110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg +T+eE++++++++  lG++ W++Ia+ ++ gRt++++k++w++
       OWM74889.1  67 RGDFTEEEEDQIIQLHSSLGNR-WSKIASNFP-GRTDNEIKNHWNT 110
                      899*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGRQPCCEKV GLKRGPWTID EDHKLMNFIL NNGIHCWRTV PKLAGLLRCG KSCRLRWINY  60
LRPDLKRGDF TEEEEDQIIQ LHSSLGNRWS KIASNFPGRT DNEIKNHWNT RIKKRLKQLG  120
IDPLTHMPIE KTEENNRSSI VHNNEKTAAE SLSFPLEEGS SDGKIPTLVC EVSREDISLE  180
VEHRKRVDEV ELLLDEDSND LLNNYAALCG NNSLLLGEGL FQDTKYTNPS MTSQSCSVSV  240
GDSINNSYTA SASESIQSIL EDSLSIGNSN SLQQWPVEGS VDSIFSWDDF DYLEQGDFSF  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.12e-81MYB family protein