PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM74857.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Nin-like

Protein Properties

Length: 942aa MW: 103145 Da PI: 5.2771

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM74857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.9	4.9e-29	572	623	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ OWM74857.1 572 AEKTVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 623 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 942 aa Download sequence
MEYPFSSKEK GMGYWIAPGA PVDGSGLFDY GPRNPLPDDP FGNFTDIMNF DSYPGLHNSP 60 MGADQILTSY TLPSYPSAPY ASPDAMALSD HTPLSSFSDQ GGGLGSSSGY RENVQIENSQ 120 VDPPEENDSS RARQIGFPDG VNPLIPQPLA RSLDEKMLKA LSMFKEFSGG GILAQVWVPI 180 RHGDQFYLST CEQPYLLDKV LEGYREVSRA FTFSAEGKPG SYPGLPGRVF MSRVPEWTSN 240 VIYYNHSEYL RVKHAVEHNI RGCIALPVFD SNEISCCAVL ELVTMKEKPN FDSEMEKVCT 300 ALQAVNLRTS PPSRLRPQCL SRNQRAALAE ITDVLRAVCH AHRFPLALTW IPCVFIEEPT 360 DEIIQVQVRE GNKDPNRKCI LCIEDSACYV NDKSMEGFVH ACVEHYLEEG QGIAGKALQS 420 SHPFFYPDVK SYDIRDYPLV HHARRFGLSA AVAIRLRSTY TGDNDYVLEF FLPVNIKGSA 480 EQQLLLDNLS RMMQRICKTL RTVSEAELVS GTEMEVADNV PPAAVSRRAS STVLSGSTSG 540 PSPRSDGLDS DGPCEQMASG SNRQQEKKRS TAEKTVSLSV LQQYFSGSLK DAAKSIGVCP 600 TTLKRICRQH GISRWPSRKI NKVNRSLRKI QTVLDSVQGV DGGLKFDPTT GGFVAAGPIS 660 QEVDVQKNLL FPDKNPSLGK NAEVFIRESS SIPSINGESS MIKLEEDECC VGRNPQGEGN 720 KAINLDKSQP IPWIGPQNPS LDSYFPKLGK NSPPKVGDPH FLLVNSGCPS TYIAAVAEDM 780 DAGVEIDNGA VVHTRPTSLS MTDSSNVSGS MMHGSSSSSQ SFEEGKQGSC KPEANCCDSG 840 TKITVKATYK DDTIRFKFNP SAGCFQLYEE VSKRFKIANG TFQLKYLDDE DEWVMLVSES 900 DLQECLEVLE SSGTQSVKFL VRDLPAAMGS SGSSNCFLTG SS

Sequence ? help Back to Top

Protein Sequence Length: 942 aa Download sequence

MEYPFSSKEK GMGYWIAPGA PVDGSGLFDY GPRNPLPDDP FGNFTDIMNF DSYPGLHNSP  60
MGADQILTSY TLPSYPSAPY ASPDAMALSD HTPLSSFSDQ GGGLGSSSGY RENVQIENSQ  120
VDPPEENDSS RARQIGFPDG VNPLIPQPLA RSLDEKMLKA LSMFKEFSGG GILAQVWVPI  180
RHGDQFYLST CEQPYLLDKV LEGYREVSRA FTFSAEGKPG SYPGLPGRVF MSRVPEWTSN  240
VIYYNHSEYL RVKHAVEHNI RGCIALPVFD SNEISCCAVL ELVTMKEKPN FDSEMEKVCT  300
ALQAVNLRTS PPSRLRPQCL SRNQRAALAE ITDVLRAVCH AHRFPLALTW IPCVFIEEPT  360
DEIIQVQVRE GNKDPNRKCI LCIEDSACYV NDKSMEGFVH ACVEHYLEEG QGIAGKALQS  420
SHPFFYPDVK SYDIRDYPLV HHARRFGLSA AVAIRLRSTY TGDNDYVLEF FLPVNIKGSA  480
EQQLLLDNLS RMMQRICKTL RTVSEAELVS GTEMEVADNV PPAAVSRRAS STVLSGSTSG  540
PSPRSDGLDS DGPCEQMASG SNRQQEKKRS TAEKTVSLSV LQQYFSGSLK DAAKSIGVCP  600
TTLKRICRQH GISRWPSRKI NKVNRSLRKI QTVLDSVQGV DGGLKFDPTT GGFVAAGPIS  660
QEVDVQKNLL FPDKNPSLGK NAEVFIRESS SIPSINGESS MIKLEEDECC VGRNPQGEGN  720
KAINLDKSQP IPWIGPQNPS LDSYFPKLGK NSPPKVGDPH FLLVNSGCPS TYIAAVAEDM  780
DAGVEIDNGA VVHTRPTSLS MTDSSNVSGS MMHGSSSSSQ SFEEGKQGSC KPEANCCDSG  840
TKITVKATYK DDTIRFKFNP SAGCFQLYEE VSKRFKIANG TFQLKYLDDE DEWVMLVSES  900
DLQECLEVLE SSGTQSVKFL VRDLPAAMGS SGSSNCFLTG SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein