PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM74533.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 529aa MW: 55321.4 Da PI: 8.2607

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM74533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	62	84	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H OWM74533.1 62 FVCEICNKGFQRDQNLQLHRRGH 84 89*******************88 PP
2	zf-C2H2	11.8	0.00076	138	160	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + OWM74533.1 138 WKCEKCSKKYAVQSDWKAHSKIC 160 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MPAEVGNSSP TASGEASVSS SGNQPPPPPP TAKKKRNLPG MPDPDAEVIA LSPKTLLATN 60 RFVCEICNKG FQRDQNLQLH RRGHNLPWKL RQRSGKEVKK RVYVCPELTC VHHDPSRALG 120 DLTGIKKHFC RKHGEKKWKC EKCSKKYAVQ SDWKAHSKIC GTREYKCDCG TLFSRRDSFI 180 THRAFCDALA EESAKAETQP QPQPQPQPYP PDQDPRLTMP SPATEKPDLE PDPKVKISAS 240 PPPPPPAAVQ PSATVLSSIL ADPPAAAELP ENHPPQVLEE QPVRTNLIGS CSSSSTSSSS 300 NGHTGNSLIA GLFAPSTSSA SLHSQQAPAF TDLIRAMAQP DGPSDLGPSP SLEPISLCLS 360 TNHGGSSSLF GGPERRQYAP PPPPPSQPAM SATALLQKAA QMGATATNAS LLRGLGIVPS 420 QPSSGAAENI HWASTSMDSE NASVASGLGL GLPSDGSSGL KELMMGTPSV FGPSKTTLDF 480 LGLGMAVGGS PNGSLSALIT SIGGGLDVAA TAAPFGGGDF SGKEMGRRS

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MPAEVGNSSP TASGEASVSS SGNQPPPPPP TAKKKRNLPG MPDPDAEVIA LSPKTLLATN  60
RFVCEICNKG FQRDQNLQLH RRGHNLPWKL RQRSGKEVKK RVYVCPELTC VHHDPSRALG  120
DLTGIKKHFC RKHGEKKWKC EKCSKKYAVQ SDWKAHSKIC GTREYKCDCG TLFSRRDSFI  180
THRAFCDALA EESAKAETQP QPQPQPQPYP PDQDPRLTMP SPATEKPDLE PDPKVKISAS  240
PPPPPPAAVQ PSATVLSSIL ADPPAAAELP ENHPPQVLEE QPVRTNLIGS CSSSSTSSSS  300
NGHTGNSLIA GLFAPSTSSA SLHSQQAPAF TDLIRAMAQP DGPSDLGPSP SLEPISLCLS  360
TNHGGSSSLF GGPERRQYAP PPPPPSQPAM SATALLQKAA QMGATATNAS LLRGLGIVPS  420
QPSSGAAENI HWASTSMDSE NASVASGLGL GLPSDGSSGL KELMMGTPSV FGPSKTTLDF  480
LGLGMAVGGS PNGSLSALIT SIGGGLDVAA TAAPFGGGDF SGKEMGRRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-150	C2H2 family protein