PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM73955.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ZF-HD | ||||||||
Protein Properties | Length: 289aa MW: 30861.6 Da PI: 8.7751 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 109.9 | 1.4e-34 | 52 | 109 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 v+Y+eClkNhAaslGgha+DGCgEfmps++++ +++++lkCaACgCHRnFHRr++++ OWM73955.1 52 VVTYRECLKNHAASLGGHALDGCGEFMPSPSATfSDPTSLKCAACGCHRNFHRRDPDD 109 589***************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MEITSTAAHA SKSPEPIPDT PIRIQPAKPV TPCTNGVLKR HRQQATPAAA VVVTYRECLK 60 NHAASLGGHA LDGCGEFMPS PSATFSDPTS LKCAACGCHR NFHRRDPDDS SPPPLPSATH 120 AIEYHPHHRH HPPPPRSPSS ASPPPISSSY APHMLLALSS GLPSGPEKPP PVAPHPTAMI 180 SPNPGSRKRF RTKFSQTQKD RMLEFAEQVG WKIQKRDEDL IQEFCSEVGV DRNVLKVWMH 240 NNKSTFGKRE TNQNTGHGSA GGGGGGNGCG GESHMAEPHM GTNGSSSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28920.1 | 4e-52 | ZF-HD family protein |