PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73874.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 497aa    MW: 55352.4 Da    PI: 6.3421
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS347.32.5e-1061364931374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                 l++lLlecA a+s +dl +a+++L +l ++asp+g +  +R++ayf++A+ +r+++s+ ++++ l   ++         +a+++++++sP++kf+h+t 
  OWM73874.1 136 LITLLLECAVAISVDDLGKAHRILLELTQMASPYGpSCAERVVAYFAKAMLSRVVNSWLGICSPLVDYKS-------IHSAFQFLNNISPFVKFAHFTS 227
                 5789*******************************9999**********************976654444.......567999**************** PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 NqaIlea+++++rvHiiD+di+qGlQWpaL++ La+R egpp++ +T+vg+    s+e l  tg++L++fA++lg+ fef++ vak+++++++++L+v+
  OWM73874.1 228 NQAILEAFHRQHRVHIIDLDIMQGLQWPALFHILATRMEGPPQITMTAVGN----SAELLTDTGKKLSNFARRLGIVFEFHP-VAKKFSEIDPSALQVR 321
                 ***************************************************....9**************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 +gE+laV++    h+l+d  +s  +    +++l+ +l P+v+++veq++ h ++sFl+rf+ al+yys++fdsl a l++++++r+kvE+ ll++ei n
  OWM73874.1 322 RGETLAVHWLQ--HSLYDVAGSDWK----MMRLLEQLAPRVITLVEQDIVH-GGSFLDRFVGALHYYSTVFDSLGAYLSPDDSNRHKVEHCLLHQEINN 413
                 *********99..999988888888....**********************.789******************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerl.eeaG.Fkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++a  g +r  +  ++++Wr+ l ++ G F ++p+s +a++qa+l+l++++  +gy++ + +g+l lgWkd +L+++SaW+
  OWM73874.1 414 ILAIGGPARSGED-KYRTWRNELfGRTGsFLQIPMSANAMAQAQLILNMFPpAHGYSLVQADGTLKLGWKDTSLYTASAWT 493
                 ********77665.5****9865366666***************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    
MIQPHDSWDY DLGVANDPIS SSSLLSKPLT VETRCGNNLE RNELSEWVER VTRQLIDDSE  60
AGSESLQAEP TVGSSDDSTP RRSARRNYLD AGTNNGNPFH WNENESLACY NSSESNSGNS  120
NSNRGLSRLD EHALSLITLL LECAVAISVD DLGKAHRILL ELTQMASPYG PSCAERVVAY  180
FAKAMLSRVV NSWLGICSPL VDYKSIHSAF QFLNNISPFV KFAHFTSNQA ILEAFHRQHR  240
VHIIDLDIMQ GLQWPALFHI LATRMEGPPQ ITMTAVGNSA ELLTDTGKKL SNFARRLGIV  300
FEFHPVAKKF SEIDPSALQV RRGETLAVHW LQHSLYDVAG SDWKMMRLLE QLAPRVITLV  360
EQDIVHGGSF LDRFVGALHY YSTVFDSLGA YLSPDDSNRH KVEHCLLHQE INNILAIGGP  420
ARSGEDKYRT WRNELFGRTG SFLQIPMSAN AMAQAQLILN MFPPAHGYSL VQADGTLKLG  480
WKDTSLYTAS AWTSQHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-135GRAS family protein