PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73862.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 314aa    MW: 35264.4 Da    PI: 10.064
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73862.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.26e-138713299
                --SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 32 esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                 s  + l+ +sg+sW v+l  +++ g+ +l +GW++F++   ++ g fvvF+++g+s f   v +f+k
  OWM73862.1  8 LSNSILLKVPSGESWPVEL--ERCNGKAFLCNGWQSFAEHYSIEHGHFVVFRYVGKSIF--QVVIFDK 71
                677899*************..*********************************99999..9999887 PP
2B345.99.8e-15219312497
                 E-..-HHHHTT-EE--HHH.HTT---...--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   4 vltpsdvlksgrlvlpkkfaeehggkke.esktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                   + +++l++g +++p kf+++++ ++  ++++l++     +sW+ +l y  +++ +r ++++GW +F k+  L+egD++vF+l+ r++  + v+vf
  OWM73862.1 219 LQIYPSHLNRGHVTVPEKFLKRINAVEGmRPVKLRIL---EKSWSANLYYhdKRGERRGWFSDGWAKFTKEASLCEGDVCVFELIARKGLVFDVMVF 312
                 444566667777***********55533245555544...59******88866666669**************************998887777666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MRKYGDALSN SILLKVPSGE SWPVELERCN GKAFLCNGWQ SFAEHYSIEH GHFVVFRYVG  60
KSIFQVVIFD KSASEVEYLL KYDDRAIRKS NPTGGSTVIR IVEAGGNDVS VEIIGDPKPQ  120
GKRSNYKQEL QCSSGPSKVV KFDPPAKVNS DSSVSSRTRS KLSLGYTESQ GKLLRRSKRL  180
NLGCLSREPA GKASPVGKSS SEALKAAEEF RATHPFFRLQ IYPSHLNRGH VTVPEKFLKR  240
INAVEGMRPV KLRILEKSWS ANLYYHDKRG ERRGWFSDGW AKFTKEASLC EGDVCVFELI  300
ARKGLVFDVM VFKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.14e-18B3 family protein