PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM73771.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 253aa MW: 28384.4 Da PI: 5.644 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.4 | 4e-14 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd++l+ ++k++G +W+ a+ g+ R++k+c++rw +yl OWM73771.1 17 KGAWSGEEDQKLIAYIKRYGIWNWNHMAKPAGLSRSGKSCRLRWMNYL 64 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 71 | 112 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 g++T+eE+e +++++++lG++ W++Ia+++ gRt++++k++w+ OWM73771.1 71 GNFTKEEEETIIRLHRKLGNR-WAAIAAKLH-GRTDNEIKNYWN 112 89*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MASSLDYDAD KDVGLKKGAW SGEEDQKLIA YIKRYGIWNW NHMAKPAGLS RSGKSCRLRW 60 MNYLRPNLKH GNFTKEEEET IIRLHRKLGN RWAAIAAKLH GRTDNEIKNY WNARLKKHSK 120 SEEAAAAHSP KNSNIVAAQE ASGGSSSSNS TAATTEPASS EEYNDPAVPL ARLWSNDTET 180 SSGNTTESVF DQVGSPQEQH LLIPVSEGTC MTMEEDFQET MSMIIAAEGF YSPYPNLQES 240 LSREYLIYDL WDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 1e-45 | MYB family protein |