PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73638.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 192aa    MW: 21424 Da    PI: 7.7549
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.1e-14103147347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + +++G+g+W++I+r     Rt+ q+ s+ qky
       OWM73638.1 103 PWTEEEHRLFLVGLQRYGKGDWRSISRNAVVSRTPTQVASHAQKY 147
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MAWSLYEDKL FEQALVVFPE ETPNRWEMIA RGVPGKSAAE VWQHYEDLVH DVMEIDCGRV  60
KLPSYKEGGT GEWGGYEPSG TISTQASSGL KAKVDAERRK GIPWTEEEHR LFLVGLQRYG  120
KGDWRSISRN AVVSRTPTQV ASHAQKYFLR LNSSAKKEKK RSSIHDVAAP DPGPSGLAHY  180
SNWAGPSPDP LT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.11e-66MYB family protein