PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM73491.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 292aa MW: 32924.9 Da PI: 5.097 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.6 | 7.7e-15 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ +ar g+ R++k+c++rw +yl OWM73491.1 22 KGLWSPEEDEKLMRYMLSNGQGCWSDVARNAGLQRCGKSCRLRWINYL 69 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1e-16 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++ OWM73491.1 75 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 118 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MRKPEKKNGG GNGKNGDVKL RKGLWSPEED EKLMRYMLSN GQGCWSDVAR NAGLQRCGKS 60 CRLRWINYLR PDLKRGAFSP QEEELIIHLH SLLGNRWSQI AARLPGRTDN EIKNFWNSTI 120 KKRLRTSSSE PKEVMEAGGG LIFLQEQGIN HSMPLMYMES LLSSSSSSTS SLQHIDGPNY 180 QMVLDPKLEI PFMAQAAGNF EGIERDQLFV PLPQLESTIN SFIEENAKAE NTTSDSNISS 240 DNVLFNNINS FSVTDNLNNY VGNPEETKTV GEWDLEELLK DVSNFPSFID FQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 1e-62 | MYB family protein |