PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73340.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 383aa MW: 43464.8 Da PI: 7.1959

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.6	9e-31	85	138	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+ekAtPk +l+lm+v gL+++hvkSHLQ++R+ OWM73340.1 85 PRLRWTPELHLAFVRAVERLGGQEKATPKLVLQLMNVRGLSIAHVKSHLQMFRS 138 8****************************************************7 PP
2	Myb_DNA-binding	49.7	8.3e-16	86	137	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k++ + m+ g++ ++ks++q+++ OWM73340.1 86 RLRWTPELHLAFVRAVERLGGQekaTPKLVLQLMNvRGLSIAHVKSHLQMFR 137 89***********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MADRIEISDA EENSDENSEI RTQGSSSDET SSQKVFCIDL NEAAAIDDYE GDQKSENDNS 60 SASCAAEGKV ERTTTVRQYV RSKMPRLRWT PELHLAFVRA VERLGGQEKA TPKLVLQLMN 120 VRGLSIAHVK SHLQMFRSKK LDESGQVLSS RNTLIRGREH LMQMYGRLDA HEHLKKDILN 180 GSRLLSPLLI KQSYDFNSTR YHPWILGNHL ARSISHCKGE SISDVTRLST PALLQHRSRK 240 GQYPFNGPSR PARFIEEKKW PPREMFMGAQ QGLGRPTNCS YDSWYVDTCP SHPLPWRFQA 300 MNKFLHAPST AAINGDGCEF EPSEARRLHE ERAELEKSLP DLKLSLSHDM LEPSADDDRT 360 GRRDRIREFE AADTTLSLSL SPC

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MADRIEISDA EENSDENSEI RTQGSSSDET SSQKVFCIDL NEAAAIDDYE GDQKSENDNS  60
SASCAAEGKV ERTTTVRQYV RSKMPRLRWT PELHLAFVRA VERLGGQEKA TPKLVLQLMN  120
VRGLSIAHVK SHLQMFRSKK LDESGQVLSS RNTLIRGREH LMQMYGRLDA HEHLKKDILN  180
GSRLLSPLLI KQSYDFNSTR YHPWILGNHL ARSISHCKGE SISDVTRLST PALLQHRSRK  240
GQYPFNGPSR PARFIEEKKW PPREMFMGAQ QGLGRPTNCS YDSWYVDTCP SHPLPWRFQA  300
MNKFLHAPST AAINGDGCEF EPSEARRLHE ERAELEKSLP DLKLSLSHDM LEPSADDDRT  360
GRRDRIREFE AADTTLSLSL SPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-37	G2-like family protein