PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73243.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 369aa MW: 41631.8 Da PI: 6.4021

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	186.3	6.9e-58	16	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdee++++yL++kv ++++++ +i evd++k+ePwdLp+++k +ekewyfF++rd+ky+tg+r+nrat+sgyWkatgkd+e+++ kg+l OWM73243.1 16 LPPGFRFHPTDEEIITHYLTPKVLNTSFSA-CAIGEVDLNKCEPWDLPMRAKMGEKEWYFFCQRDRKYPTGTRTNRATESGYWKATGKDREIYKGKGRL 113 79***********************999.67***********99999****************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfy+grapkgekt+Wvmhe+rle OWM73243.1 114 VGMKKTLVFYRGRAPKGEKTNWVMHEFRLE 143 *************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MEESVVVNKE EDLVDLPPGF RFHPTDEEII THYLTPKVLN TSFSACAIGE VDLNKCEPWD 60 LPMRAKMGEK EWYFFCQRDR KYPTGTRTNR ATESGYWKAT GKDREIYKGK GRLVGMKKTL 120 VFYRGRAPKG EKTNWVMHEF RLEGKFYYNL PRASKDDWVV CRVFHKNTGL KKAPLVPGGG 180 LARSNSYIDD DMLDYCSTSP PPLIDPTCSS GPTSSGFTDA IKDNEFKFKG MGNTINLSSS 240 SSMPQSLDGN YFYFPPRSTE LQDQMVYHNN NYSQMMSMML MNPISSYQGS GSINPGLLHR 300 GQMGGQNCKV EQFSSKHDYS MVSLSQDTSL STDVNTTAEI SSSKQENLGL TSNNNNIEDI 360 SDVACLWDF

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MEESVVVNKE EDLVDLPPGF RFHPTDEEII THYLTPKVLN TSFSACAIGE VDLNKCEPWD  60
LPMRAKMGEK EWYFFCQRDR KYPTGTRTNR ATESGYWKAT GKDREIYKGK GRLVGMKKTL  120
VFYRGRAPKG EKTNWVMHEF RLEGKFYYNL PRASKDDWVV CRVFHKNTGL KKAPLVPGGG  180
LARSNSYIDD DMLDYCSTSP PPLIDPTCSS GPTSSGFTDA IKDNEFKFKG MGNTINLSSS  240
SSMPQSLDGN YFYFPPRSTE LQDQMVYHNN NYSQMMSMML MNPISSYQGS GSINPGLLHR  300
GQMGGQNCKV EQFSSKHDYS MVSLSQDTSL STDVNTTAEI SSSKQENLGL TSNNNNIEDI  360
SDVACLWDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-111	NAC family protein