PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM72815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | bHLH | ||||||||
Protein Properties | Length: 316aa MW: 32976.2 Da PI: 7.0258 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.8 | 1.5e-11 | 163 | 208 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR +i +++ L+el+P+a K +Ka++L + +eY+k Lq OWM72815.1 163 HSIAERLRRVKISERMKALQELVPNA-----NKTDKASMLDEIIEYVKFLQ 208 99***********************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MQPRDIKEET RSMMNSLLLD PSMIRHNFPD HHLDLQAPPA FGPTHPALVD NFLDHLLASL 60 PSGQWPDLAA ASTVQLAGDA GATATDQPHI LLLDGAAREF LDGGNGAVGG DPSSFNCLPQ 120 GQAEGNFASK SPAPSGLPAG GGAAAAQPKK KIRARRGQAT DPHSIAERLR RVKISERMKA 180 LQELVPNANK TDKASMLDEI IEYVKFLQVQ VKLLSMSRLG GASGAVAPFP ADISSQHRGG 240 GPTIGPHLNG DQTARPSDSS PNATEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLAATIS 300 TTAGSRGTAV SSGGSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58010.1 | 3e-66 | bHLH family protein |