PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM72220.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 412aa MW: 47113.5 Da PI: 6.0862

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM72220.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.2	2.4e-51	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+++k++l +vi+evd++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + OWM72220.1 11 VPPGFRFHPTEEELLHYYLRKKVAQEKIDL-DVIREVDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYS-G 107 69**************************.9***********964443122456**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +gl+ktLvfykgrap+g+k+dW+mheyrl OWM72220.1 108 FRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 139 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MNLSINGQSQ VPPGFRFHPT EEELLHYYLR KKVAQEKIDL DVIREVDLNK LEPWDIQEKC 60 RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKIIYSGFRR IGLRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD ETPSIDPSAL NPTVDQLSTE EGWVVCRVFR KKNFQKTLDH 180 SPKSSSSTSM DSKLIHNLST TNNLNINNIK DNPSSVLDQI LLYMGERNSA CKIETSQPRM 240 PVTLDPSDYC DTVSSIKLIH QPLPDLHERF MHLPRLECPA TLPSIFPTPP LDQHNVHQPF 300 DELTDHNQDQ STQSLTVGDW AAFDRLVASQ LNGQAETPSD SAFGLQLANE EEEEEEEEDA 360 NEGQVPSIPR FRISRPHHQN LQPYNGNENA DLWSFTKSSS PQPSDPLRHL SV

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MNLSINGQSQ VPPGFRFHPT EEELLHYYLR KKVAQEKIDL DVIREVDLNK LEPWDIQEKC  60
RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKIIYSGFRR IGLRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD ETPSIDPSAL NPTVDQLSTE EGWVVCRVFR KKNFQKTLDH  180
SPKSSSSTSM DSKLIHNLST TNNLNINNIK DNPSSVLDQI LLYMGERNSA CKIETSQPRM  240
PVTLDPSDYC DTVSSIKLIH QPLPDLHERF MHLPRLECPA TLPSIFPTPP LDQHNVHQPF  300
DELTDHNQDQ STQSLTVGDW AAFDRLVASQ LNGQAETPSD SAFGLQLANE EEEEEEEEDA  360
NEGQVPSIPR FRISRPHHQN LQPYNGNENA DLWSFTKSSS PQPSDPLRHL SV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	1e-101	NAC family protein