PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM72192.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 316aa MW: 33882.6 Da PI: 8.4088

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM72192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.2	4.2e-39	53	112	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rknk + OWM72192.1 53 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKGR 112 7899*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MDTAQWPQEI VVKPLEEIVV PIPNTTTLCA PKQSGSTSTG NSNGVERKPR PQKEQALNCP 60 RCNSTNTKFC YYNNYSLTQP RYFCKTCRRY WTEGGSLRNI PVGGGSRKNK GRPSSSACST 120 SSTSTSTSSS SAPPPMINPL LDPHHMMSAS KMRVSSSSAA TAAAMCNGQN PSKGQGQDLS 180 LGSSLELLNS KGLLSSFMSM PLSVSHDPSG VYTPPPPHGL FPGFQDMKPA SGLGFSLDGM 240 GGGFRSALQD SAGNMDNGGG RLLFPFEELK QTNDSVEHHQ DNRSGDNHQH QQQQQASDHH 300 HHPNGFWSGI LGGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	7e-50	Dof family protein