PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM72134.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 873aa MW: 99059.3 Da PI: 6.4926

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM72134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.8	3e-09	258	302	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++eE++l++ + + lG+++W+ I++ k +t+ q+ + ky OWM72134.1 258 NWSAEEHKLFLLGLQDLGKDDWTGISENYVKSKTPIQVARHAKKY 302 8****************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 873 aa Download sequence
MMQYDSREQE VFSDIAKIMF KTSHPYPVTY DVVQDDRLST LELIVMALQG DFNEEARNDW 60 TREDFEENEI TMHVPLMTGD LQVNLKNGMG TLGNFTFIYD SSIARSGKSR LGVKIVWRDA 120 EGVHIREGIS NAFVVEGVEV TRKHDAAVKQ TRLPEDPPPA SDVDALARLW SPLQNSAEGE 180 TTEFYDQFFE SMWNVGVEYK HKQKYIVKSR RAAVRWLKLK AVFQWAILRR IVMRKRAQRM 240 VVWTQVRKRL EEWSKGVNWS AEEHKLFLLG LQDLGKDDWT GISENYVKSK TPIQVARHAK 300 KYFQDTSRSG INDEQEVLEM SEHPRQEEYE LHKPADSSIS QPGYSLTLFP SLLSAHGEEP 360 ADDEIIAADM MVPKQSEPMK SNSNRESAPP NPDSSHSINP LTLFPSLLTE HGDETSEEDF 420 VMVPDTDIKF PMISVDIDEL NDPSNLISEK QMHHPTATEA HLPKNSPPSS MMDREIPDDV 480 TRQSKYGNEH HKIVQGNEHQ PSNKPRQTAL LWHKLRSPLS WLSMFKPIAS RRVKQKAVSQ 540 SGADGEEGDS IFANVSVLTE DSASSLEANS SFKKDLSSPL EAITSSVQTP HSPKFSTMSP 600 SQSLSRLTSM QLSFNQAIKA TQNFSRSMKI GKGKLRLVYK GQLEDGQVVA IKRVKRVQID 660 EFSRNVELLV KIDHQNLVKL LGFIDKGVEC LIVTEYVPNG TLRAHLDEKQ ITHQDVKSSN 720 VLLTDSMRAK VADFGLAGPE HSHVNSVVKG TVGYLDPEYM KSHQLTAKSD VYSFGVLLLE 780 NLTGRRPVEL ERRIDERVTL RWVFKKLEEG KVLDLVDPKM EAAVDGQILM RFFELAIQCV 840 APVQADRPDM KLVGEQLWGI RADHKRSRRG YQV

Sequence ? help Back to Top

Protein Sequence Length: 873 aa Download sequence

MMQYDSREQE VFSDIAKIMF KTSHPYPVTY DVVQDDRLST LELIVMALQG DFNEEARNDW  60
TREDFEENEI TMHVPLMTGD LQVNLKNGMG TLGNFTFIYD SSIARSGKSR LGVKIVWRDA  120
EGVHIREGIS NAFVVEGVEV TRKHDAAVKQ TRLPEDPPPA SDVDALARLW SPLQNSAEGE  180
TTEFYDQFFE SMWNVGVEYK HKQKYIVKSR RAAVRWLKLK AVFQWAILRR IVMRKRAQRM  240
VVWTQVRKRL EEWSKGVNWS AEEHKLFLLG LQDLGKDDWT GISENYVKSK TPIQVARHAK  300
KYFQDTSRSG INDEQEVLEM SEHPRQEEYE LHKPADSSIS QPGYSLTLFP SLLSAHGEEP  360
ADDEIIAADM MVPKQSEPMK SNSNRESAPP NPDSSHSINP LTLFPSLLTE HGDETSEEDF  420
VMVPDTDIKF PMISVDIDEL NDPSNLISEK QMHHPTATEA HLPKNSPPSS MMDREIPDDV  480
TRQSKYGNEH HKIVQGNEHQ PSNKPRQTAL LWHKLRSPLS WLSMFKPIAS RRVKQKAVSQ  540
SGADGEEGDS IFANVSVLTE DSASSLEANS SFKKDLSSPL EAITSSVQTP HSPKFSTMSP  600
SQSLSRLTSM QLSFNQAIKA TQNFSRSMKI GKGKLRLVYK GQLEDGQVVA IKRVKRVQID  660
EFSRNVELLV KIDHQNLVKL LGFIDKGVEC LIVTEYVPNG TLRAHLDEKQ ITHQDVKSSN  720
VLLTDSMRAK VADFGLAGPE HSHVNSVVKG TVGYLDPEYM KSHQLTAKSD VYSFGVLLLE  780
NLTGRRPVEL ERRIDERVTL RWVFKKLEEG KVLDLVDPKM EAAVDGQILM RFFELAIQCV  840
APVQADRPDM KLVGEQLWGI RADHKRSRRG YQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16350.1	5e-18	MYB_related family protein