PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM72019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | NF-YC | ||||||||
Protein Properties | Length: 144aa MW: 15517.9 Da PI: 9.3153 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 100.2 | 1.5e-31 | 22 | 104 | 19 | 96 |
NF-YC 19 helPlarikkilkad.....edvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 h lPlarikki+k e+vkmis eaP+++skacelfi elt rsw+ + + krrt++k d+a+av td fdflv+ v OWM72019.1 22 HLLPLARIKKIMKRSsgnggEEVKMISGEAPIVFSKACELFIEELTRRSWIMTVQGKRRTIHKDDVASAVVATDLFDFLVNLV 104 789**********75344448**********************************************************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 144 aa Download sequence |
MRQAGTYSGI LCGGISGKTG PHLLPLARIK KIMKRSSGNG GEEVKMISGE APIVFSKACE 60 LFIEELTRRS WIMTVQGKRR TIHKDDVASA VVATDLFDFL VNLVDGSGRV GMASGKGDEG 120 DHDLVVHDQT MSMATRTTSL VPRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G56170.1 | 4e-32 | NF-YC family protein |