PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71759.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family YABBY
Protein Properties Length: 195aa    MW: 21760.7 Da    PI: 8.8996
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71759.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY214.92.6e-6661682170
       YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100
                 d+  +++q+Cy+ CnfC+ +lavsvP +sl+ vvt+rCGhC++l svn+a a +  +++s    s  ++l++ ++  +++++    ++++++++v++ +
  OWM71759.1   6 DIAATPDQLCYIPCNFCHIVLAVSVPCSSLLDVVTIRCGHCANLWSVNMAAAYHSSSSSSS--SSSWPDLHH-HQIPKQDYRIDSASSSKSKNKVAAVR 101
                 57789********************************************999998888886..566666554.45555666666666666666666545 PP

       YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                  +  + +e      v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihfgl
  OWM71759.1 102 APPPKLNE---ERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 168
                 43333333...33589****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MSSCVDIAAT PDQLCYIPCN FCHIVLAVSV PCSSLLDVVT IRCGHCANLW SVNMAAAYHS  60
SSSSSSSSSW PDLHHHQIPK QDYRIDSASS SKSKNKVAAV RAPPPKLNEE RVVNRPPEKR  120
QRVPSAYNQF IKEEIQRIKA NNPDISHREA FSTAAKNWAH FPHIHFGLML QTNNQPQLES  180
SAEKHVMMPR AALHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.12e-73YABBY family protein