PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM71256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | NF-YB | ||||||||
Protein Properties | Length: 161aa MW: 17969.7 Da PI: 4.6363 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 165.5 | 7.1e-52 | 18 | 111 | 2 | 95 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 +eqd +lPianv+rimk++lP nakisk+aket+qecvsefisfvtseas+kc++e+rkt+++dd++wa+atlGf+dy+ plk+yl++yre e+ OWM71256.1 18 KEQDMLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVTSDDICWAMATLGFDDYAGPLKQYLERYRESEE 111 89*****************************************************************************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MAGNTGNSTS EDGGSAIKEQ DMLLPIANVG RIMKQILPPN AKISKEAKET MQECVSEFIS 60 FVTSEASEKC RKERRKTVTS DDICWAMATL GFDDYAGPLK QYLERYRESE EGDRAKQERS 120 QDEDKSSYRD QRGADGDEAE ASARPYGIER SNSASYSSRP F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 1e-54 | NF-YB family protein |