PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM71151.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

ARR-B

Protein Properties

Length: 654aa MW: 71272 Da PI: 6.275

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM71151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.4	7.8e-29	202	255	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl OWM71151.1 202 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 255 79*****************.******************************8 PP
2	Myb_DNA-binding	42.6	1.4e-13	204	254	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ OWM71151.1 204 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 254 678***********************************************7 PP
3	Response_reg	85.2	1.9e-28	22	130	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++++++l+ +y ev+++ +e+al+ll++++ +D+++ D+ mp+mdG++ll++i e +lp+i+++a + ++ + + + Ga OWM71151.1 22 VLVVDDDPTCLKIVEKMLKTCNY-EVTTCNRAEKALALLQAHRngFDIVISDVHMPDMDGFKLLERIGLEM-DLPVIMMSADDGKQVVMKGVTHGAC 116 89*******************.***************************************6654.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + OWM71151.1 117 DYLIKPIRIEELKN 130 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MSTSTWKSGE SVSEQFPAGL RVLVVDDDPT CLKIVEKMLK TCNYEVTTCN RAEKALALLQ 60 AHRNGFDIVI SDVHMPDMDG FKLLERIGLE MDLPVIMMSA DDGKQVVMKG VTHGACDYLI 120 KPIRIEELKN IWQHVVRKRK NEWKELEQST SIEDGVDRAH KQSEDADYSS SANEGGNWKS 180 SKRRKDEEDE LEERDDTSTL KKPRVVWSVE LHQQFVAAVN QLGIDKAVPK KILELMNVPG 240 LTRENVASHL QKYRLYLRRL SGVSQHQGGV SNSFMGTQDA TFSPISSLTG LDLQTLAVTG 300 QLPPQSLATL QAVGFARPSP KSGLSIPMID QRNLFSFDNS KFKFGEGQGQ QQQQQPNLGN 360 NKQLNLLHGI PTTMEPKQLA NLHQSLENIS NMQVPVSQGN SILMHRGTAR LPPNVGQPVT 420 SNGLPGGLLP RNGHAENGRG AGGYTNPVPQ TTSSAALTFP LNHGTELPGT NSFPPLGSPP 480 GIQSLTHKGQ FPQDITVNSE IKGSTAGGFI PGYYVLNDLQ QLRSHDWELQ NVGLNFDSPQ 540 SASSLPGSLE SASSSLYVQQ GISRSGPLRN SSSGGSKPSF PVEGTHNQNL GSIVNSSVRI 600 KSENVVDAGC PSTLYPEHFG QEDLMSALLK QQEGIGPGNP DFDFDGYNID NIPV

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MSTSTWKSGE SVSEQFPAGL RVLVVDDDPT CLKIVEKMLK TCNYEVTTCN RAEKALALLQ  60
AHRNGFDIVI SDVHMPDMDG FKLLERIGLE MDLPVIMMSA DDGKQVVMKG VTHGACDYLI  120
KPIRIEELKN IWQHVVRKRK NEWKELEQST SIEDGVDRAH KQSEDADYSS SANEGGNWKS  180
SKRRKDEEDE LEERDDTSTL KKPRVVWSVE LHQQFVAAVN QLGIDKAVPK KILELMNVPG  240
LTRENVASHL QKYRLYLRRL SGVSQHQGGV SNSFMGTQDA TFSPISSLTG LDLQTLAVTG  300
QLPPQSLATL QAVGFARPSP KSGLSIPMID QRNLFSFDNS KFKFGEGQGQ QQQQQPNLGN  360
NKQLNLLHGI PTTMEPKQLA NLHQSLENIS NMQVPVSQGN SILMHRGTAR LPPNVGQPVT  420
SNGLPGGLLP RNGHAENGRG AGGYTNPVPQ TTSSAALTFP LNHGTELPGT NSFPPLGSPP  480
GIQSLTHKGQ FPQDITVNSE IKGSTAGGFI PGYYVLNDLQ QLRSHDWELQ NVGLNFDSPQ  540
SASSLPGSLE SASSSLYVQQ GISRSGPLRN SSSGGSKPSF PVEGTHNQNL GSIVNSSVRI  600
KSENVVDAGC PSTLYPEHFG QEDLMSALLK QQEGIGPGNP DFDFDGYNID NIPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	0.0	ARR-B family protein