PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70868.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 365aa MW: 41024.7 Da PI: 8.7176

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	100.5	1.5e-31	28	135	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT....X..TTSEEEEESXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks....k..ekiweFkhksFkkgkke 92 Fl+k+y++++d++ ++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+Y +++ + + + k ++ weF+++ F++g+k+ OWM70868.1 28 FLTKTYQLVDDPASDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYVSLCTNKIDLSLLAkgfrKivPDRWEFANEFFRRGEKH 124 9********************************************************8777777666544455551669************ PP XXXXXXXXXXX CS HSF_DNA-bind 93 llekikrkkse 103 ll++i+r+ks+ OWM70868.1 125 LLCEIHRRKSA 135 ******985 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MAALMVDNSC EGLLLSLESQ KSSVPAPFLT KTYQLVDDPA SDHIVSWGED DTTFVVWRPP 60 EFARDLLPNY FKHNNFSSFV RQLNTYVSLC TNKIDLSLLA KGFRKIVPDR WEFANEFFRR 120 GEKHLLCEIH RRKSAPPHHV PSLRQDFDLP RGPSPTCFFP FPARASISPP ASDESTYRPP 180 IRNSWWSIID SQPPPPPPLQ SSAAPMPSPA TAALSKDNER LRRSNDMLMS ELAHMRKLYN 240 DIIYFVQNHV KPVSPSYNSV LCHSGQNPSL TRNHSLCLGY KYPVFTNPSN KLQPKVAVLD 300 EEPAGSGTKL FGVPLQNSTG TKKRLHSDCS SGFTLNAPES TNTKARLMIL DKDELRLNLM 360 PSSTC

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MAALMVDNSC EGLLLSLESQ KSSVPAPFLT KTYQLVDDPA SDHIVSWGED DTTFVVWRPP  60
EFARDLLPNY FKHNNFSSFV RQLNTYVSLC TNKIDLSLLA KGFRKIVPDR WEFANEFFRR  120
GEKHLLCEIH RRKSAPPHHV PSLRQDFDLP RGPSPTCFFP FPARASISPP ASDESTYRPP  180
IRNSWWSIID SQPPPPPPLQ SSAAPMPSPA TAALSKDNER LRRSNDMLMS ELAHMRKLYN  240
DIIYFVQNHV KPVSPSYNSV LCHSGQNPSL TRNHSLCLGY KYPVFTNPSN KLQPKVAVLD  300
EEPAGSGTKL FGVPLQNSTG TKKRLHSDCS SGFTLNAPES TNTKARLMIL DKDELRLNLM  360
PSSTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	5e-96	HSF family protein