PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70736.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 349aa    MW: 39703.1 Da    PI: 4.7043
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70736.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.4e-12180223654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  OWM70736.1 180 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYLKEL 223
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MEFYGPGYME DQSLMFQRHE LCDANDVPPE MNDLFSGAWS IDQYLNGSIY PNTGFLGQED  60
YFSAFSEVYG QFGDHLFVPQ ATDSSPFSPW KIADSSSSLN VDSPPFPLVE EQFPWHPLAE  120
EEELDVMMSG FRALEEPGAC KLEPAEEPLE RVLGSSSGAE LRVRRKGRPK KAGGQPSKNL  180
MAERRRRKRL NDRLSMLRSI VPKISKMDRT SILGDTIDYL KELLQNINNL QHQLEWGPNQ  240
LNIMDILKDM RPNEMLVRNS PKFNVERRNV DTKIEVCCAM KPELLLSTVN RLDSLGLEIE  300
QCVISCFNDF AMQASCSHQQ VPEHQMEVIN PEDIKQALFK NAGYGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183190ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-68bHLH family protein