PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70661.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ARR-B
Protein Properties Length: 1005aa    MW: 110988 Da    PI: 6.2995
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like26.61.3e-082592912655
     G2-like  26 kAtPkti...lelmkvkgLtlehvkSHLQkYRl 55 
                 +A+Pk+i   ++ m+v g+++++v SHLQk+R+
  OWM70661.1 259 QAVPKEIldeMQRMGVTGISRQNVSSHLQKHRT 291
                 79*****33345778999**************7 PP
2G2-like37.36.2e-12734802155
     G2-like   1 kprlrWtpeLHerFveaveqLG...........GsekAtPktil...elmkvkgLtlehvkSHLQkYRl 55 
                 kpr+rWtp+L ++F ea++++             +e+  Pk+il   + m+v gLt+++v SHLQk+R+
  OWM70661.1 734 KPRVRWTPDLQHKFAEAIDRIDkrksrrfrndeSEEQVAPKEILdelQRMGVIGLTRQNVSSHLQKHRT 802
                 79*****************99522222222222456789****7333689******************7 PP
3Response_reg36.72.1e-13171301107
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH.HHHHESEEEEESSCTT.SEHHHHHHHHHHHT..TTSEEEEEE.STTT..HHHHHHHH CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealell.kekdpDlillDiempg.mdGlellkeireee..pklpiivvt.ahge..eedaleal 90 
                   vl+v D+p   e l++al++    ev+ ++ + +   ll ++ ++D++l   +m +   Gl+ll +ir+ +  ++lp+i+v  + +e   + +++ +
    OWM70661.1  17 VLLVGDDPMSVEPLKNALRETCKHEVTICTGANARSSLLlQKTKFDIVLAEYRMGDlDCGLQLLDSIRSMKilDNLPVIFVFsGDQEidVDVLKRMI 113
                   89*****************5444466655555555555546777************556**************99**99886455555256666777 PP

                   HTTESEEEESS--HHHH CS
  Response_reg  91 kaGakdflsKpfdpeel 107
                   + Ga  fl Kp+  + l
    OWM70661.1 114 EKGACHFLKKPIGDDTL 130
                   ************99887 PP
4Response_reg44.48.8e-165326441107
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH.HHHHESEEEEESSCTTSEHHHHHHHHHHHT..TTSEEEEEE..STTT.HHHHHHHHH CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealell.kekdpDlillDiempgmdGlellkeireee..pklpiivvt..ahge.eedalealk 91 
                   vl+v D+p+  e l++al++    ev++++ +++a  ll ++k++D++l+     +mdGl++l +i++ e  ++lp+i++   +++   + +++ ++
    OWM70661.1 532 VLLVGDNPASVEPLKNALQEICKHEVTTCTVPKDAPSLLlEKKRFDIVLIEYGTGDMDGLQILDSIQSMEkaDDLPVIFLLsgGQDMdVDVLKRGVE 628
                   89*****************7666699999999999888846666**********************88888999****986332222366788999* PP

                   TTESEEEESS--HHHH CS
  Response_reg  92 aGakdflsKpfdpeel 107
                    G+ df++Kp+  + l
    OWM70661.1 629 KGVCDFFTKPIRDDTL 644
                   ***********99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1005 aa     Download sequence    
MDRTLTPGKF ATTGLRVLLV GDDPMSVEPL KNALRETCKH EVTICTGANA RSSLLLQKTK  60
FDIVLAEYRM GDLDCGLQLL DSIRSMKILD NLPVIFVFSG DQEIDVDVLK RMIEKGACHF  120
LKKPIGDDTL KMIWTHVFRF RLWKEGVVDN NNDVISEVNQ QDRLYSPIQS SFSDSGTQGR  180
SEGRSSGKRS RDSADDDQHD ESNDSKGNKT ASSAAVIAKK SRVHWTPELQ QKFLEAIDRI  240
NKRKNPGWRL RNDESEELQA VPKEILDEMQ RMGVTGISRQ NVSSHLQKHR TNMKKPLGQC  300
SEPQNGPLGP MNYSSLGQYS SLLVDSPYPP APSDPYPAPT RYLPSQNFAI GQAIRQPDNY  360
ISISQPVGPL LVGPMTGQQL ALPLNQINQS PNFGNSSPHQ VIGSAASANL LFAPRSVFAN  420
QIQPLISPGP HSINQSTNFS PAIDHCQFSP AATSLNEDMA EQISFDGLDD LQWFENWSGE  480
PIKNAWDLTA KEKVEVRSVS TSSRFMMSSE ESSLAKTQER SPAEFAATGL RVLLVGDNPA  540
SVEPLKNALQ EICKHEVTTC TVPKDAPSLL LEKKRFDIVL IEYGTGDMDG LQILDSIQSM  600
EKADDLPVIF LLSGGQDMDV DVLKRGVEKG VCDFFTKPIR DDTLKLIWTH VFRSRILRKE  660
GVSVNDDAVS EVNQRDRLDS PIQSSSGHDS AAHGMSGGSS GMKRSRDSAE DQSDESNDSN  720
KGTRTASAAA ITKKPRVRWT PDLQHKFAEA IDRIDKRKSR RFRNDESEEQ VAPKEILDEL  780
QRMGVIGLTR QNVSSHLQKH RTNKKKQVQC SELQNGPLGR LNHSSPGQYS SLPIGSSYPP  840
APTAPYPAPA RYLPSQNFAI GQAIRQPDNY ISIGQLVGPL PVCPMMTQQL TLPLNSQINP  900
SPSFCNSSPH HVIRSAAPAN LQFGPPCVFA NQNQPLISSS GPHSINQSTN FSPTIDHCQF  960
VQATTSLNED IAEQISFDGL DDLPWFENWT GEPIENARER TLGAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.12e-28ARR-B family protein