PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70556.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 364aa MW: 40991.8 Da PI: 10.3804

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	36.7	7.6e-12	68	142	17	98
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++p++fa+++g+ s + l+ ++g+ W+v + +k++g+++l+ Wk+F k L+eg ++ F+++g s f +v +++ OWM70556.1 68 CIPNRFAAKYGSY--LSSPVLLKVSDGKIWKVGI--KKCGGAIWLS-RWKKFIKNYCLREGYTMFFRYEGYSWF--HVVILD 142 69******876..55569999999****..99999999.9********************999999..777665 PP
2	B3	54.6	2e-17	254	354	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS...-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg...rsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+ +l s+++ sg +++ +f+ ++ + ++e+ ++tl+++ + rsW vk+ +y+ +++ l +GW +Fv +n L++gD+++F+l+++s f + OWM70556.1 254 FQVQLRESYMT-SGGVSICSDFMLKNgvKREPESFDMVTLKHPGSdqrRSWAVKMfTYEPEKRG-KLCGGWAKFVADNSLRVGDVIIFELVDTSVF--H 348 66677555555.556*********7655555555677777666999***445555555.5777*******************99999.. PP EEEE-S CS B3 94 vkvfrk 99 v++fr+ OWM70556.1 349 VHIFRS 354 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MASRGRRGGG QSSSRSGRNR GIPVTRHFSR VLNPEILQLK KLVSIPCVLS VVTECAGARY 60 FYDHLDSCIP NRFAAKYGSY LSSPVLLKVS DGKIWKVGIK KCGGAIWLSR WKKFIKNYCL 120 REGYTMFFRY EGYSWFHVVI LDGAGMEIKY PSRSIHRKKA RAATQTFSQE MEESVIDIGN 180 STEEGSGDES DDPSQSSTSK VKAVESRRKK KYRMKSRSSP GPADGEGAPR WGRSRNLSRA 240 LEAANQFKTK NPSFQVQLRE SYMTSGGVSI CSDFMLKNGV KREPESFDMV TLKHPGSDQR 300 RSWAVKMFTY EPEKRGKLCG GWAKFVADNS LRVGDVIIFE LVDTSVFHVH IFRSSSRATP 360 IEIE

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MASRGRRGGG QSSSRSGRNR GIPVTRHFSR VLNPEILQLK KLVSIPCVLS VVTECAGARY  60
FYDHLDSCIP NRFAAKYGSY LSSPVLLKVS DGKIWKVGIK KCGGAIWLSR WKKFIKNYCL  120
REGYTMFFRY EGYSWFHVVI LDGAGMEIKY PSRSIHRKKA RAATQTFSQE MEESVIDIGN  180
STEEGSGDES DDPSQSSTSK VKAVESRRKK KYRMKSRSSP GPADGEGAPR WGRSRNLSRA  240
LEAANQFKTK NPSFQVQLRE SYMTSGGVSI CSDFMLKNGV KREPESFDMV TLKHPGSDQR  300
RSWAVKMFTY EPEKRGKLCG GWAKFVADNS LRVGDVIIFE LVDTSVFHVH IFRSSSRATP  360
IEIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	7e-27	B3 family protein