PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70554.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 632aa MW: 64619.1 Da PI: 9.7714

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70554.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37.6	3.8e-12	405	482	11	95
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 l+ g l++p +f++e+g + ++ +l g+ W+v l r+++g+ +l +GW++ k +++eg +v F+++g+s f v OWM70554.1 405 LQFGKLSIPDTFVTEYGRNLSSP---ILLKVYGKIWQVGL--RGRGGSLWLCTGWRKLMKKYRMREGYSVFFRYEGNSMF--DVV 482 555789********8775454...6666799***..*******************************99877..444 PP

Sequence ? help Back to Top
Protein Sequence Length: 632 aa Download sequence
MSGSERGVMA SSRGEPFNNV GGLQKGPLTS QPMIHNMRLA FSGDGTAVYK PITPSSPSYH 60 SPNGVGAGGG AEAGSEAGGI NVNIGGGGVG AEQQPVKKKR GRPRKYGPDG SMSLALIPAA 120 AGAVAASTGG FPSPPASAGG GASGGSAASP TSVKKSRGRP PGSSNKKSRL EALGSSGTGF 180 TPYIITVKAG EDVSSKIMSF LQHGSKAVCI LSANGAISNV TLRQPATSGG TVTYEGRFEI 240 LSLSGSFLLS EVGGQRSRTG GLSVSLSGPD GQVLGGGVAG LLTAASPIQV VVGSFNAEGG 300 GSGRRKEQKA PNQAEPFFAP SKLASGPGGG TMGGSSSAWV DGTASGSSDG PGSPLEQTMG 360 HGAGLQGLSS MPWKRGGTQS QSWSPRSSGV LETPHFSRVL NPEILQFGKL SIPDTFVTEY 420 GRNLSSPILL KVYGKIWQVG LRGRGGSLWL CTGWRKLMKK YRMREGYSVF FRYEGNSMFD 480 VVILDDTGIE IEYPLRLTHG KRARARRPSP VIDIGNSTEE ESCDESDEPS ESLASKVKAD 540 NSGKKYQLQV EVDSSDAVDG VGYSKEPKAA KLASGHGGGT IRASSLELGA GNSSGSSDWL 600 GSPLEPTMGR NSSLQASEAC GGSKAEDAIY LS

Sequence ? help Back to Top

Protein Sequence Length: 632 aa Download sequence

MSGSERGVMA SSRGEPFNNV GGLQKGPLTS QPMIHNMRLA FSGDGTAVYK PITPSSPSYH  60
SPNGVGAGGG AEAGSEAGGI NVNIGGGGVG AEQQPVKKKR GRPRKYGPDG SMSLALIPAA  120
AGAVAASTGG FPSPPASAGG GASGGSAASP TSVKKSRGRP PGSSNKKSRL EALGSSGTGF  180
TPYIITVKAG EDVSSKIMSF LQHGSKAVCI LSANGAISNV TLRQPATSGG TVTYEGRFEI  240
LSLSGSFLLS EVGGQRSRTG GLSVSLSGPD GQVLGGGVAG LLTAASPIQV VVGSFNAEGG  300
GSGRRKEQKA PNQAEPFFAP SKLASGPGGG TMGGSSSAWV DGTASGSSDG PGSPLEQTMG  360
HGAGLQGLSS MPWKRGGTQS QSWSPRSSGV LETPHFSRVL NPEILQFGKL SIPDTFVTEY  420
GRNLSSPILL KVYGKIWQVG LRGRGGSLWL CTGWRKLMKK YRMREGYSVF FRYEGNSMFD  480
VVILDDTGIE IEYPLRLTHG KRARARRPSP VIDIGNSTEE ESCDESDEPS ESLASKVKAD  540
NSGKKYQLQV EVDSSDAVDG VGYSKEPKAA KLASGHGGGT IRASSLELGA GNSSGSSDWL  600
GSPLEPTMGR NSSLQASEAC GGSKAEDAIY LS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-18	B3 family protein