PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70321.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 349aa MW: 39800 Da PI: 7.8246

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93	2.5e-29	214	268	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LH++F+++v+ LGG+ekAtPk il+lm+v+ Lt+ h+kSHLQkYR+ OWM70321.1 214 KTRIRWTQDLHDKFLQCVDILGGAEKATPKGILKLMDVERLTIFHIKSHLQKYRT 268 68****************************************************8 PP
2	Myb_DNA-binding	39.6	1.2e-12	218	267	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++++++++v lGg t+k I + m +++t ++ks++qky+ OWM70321.1 218 RWTQDLHDKFLQCVDILGGAekaTPKGILKLMDvERLTIFHIKSHLQKYR 267 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MSSEGIVSKQ KQLRSYPSQI YLQSQPLLQC LQLRGSPSSA NLGGSGFKNI DDTCNMASKF 60 SSQQGDSEIT GTVACSQPFR YQKSSLFPSY DDPQYSTEEK DATAFQSGDD LQSVVEFHMC 120 NSQSRRLSYE NTAPSNISFR QLQDPFYEEK IARYRQSIVS FQECQNCKVD YDTSSPPQSQ 180 RSDSCIQPEK HPPACSGGVF YWPRRKTNST VPSKTRIRWT QDLHDKFLQC VDILGGAEKA 240 TPKGILKLMD VERLTIFHIK SHLQKYRTTK CMPDSKEGAG QSYEPVQLNS SVLELKTGKQ 300 IVEALQMQLD IQMRLHEQLE VWFLIMTLNL FSHLFRFIWT SFMNITCCS

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MSSEGIVSKQ KQLRSYPSQI YLQSQPLLQC LQLRGSPSSA NLGGSGFKNI DDTCNMASKF  60
SSQQGDSEIT GTVACSQPFR YQKSSLFPSY DDPQYSTEEK DATAFQSGDD LQSVVEFHMC  120
NSQSRRLSYE NTAPSNISFR QLQDPFYEEK IARYRQSIVS FQECQNCKVD YDTSSPPQSQ  180
RSDSCIQPEK HPPACSGGVF YWPRRKTNST VPSKTRIRWT QDLHDKFLQC VDILGGAEKA  240
TPKGILKLMD VERLTIFHIK SHLQKYRTTK CMPDSKEGAG QSYEPVQLNS SVLELKTGKQ  300
IVEALQMQLD IQMRLHEQLE VWFLIMTLNL FSHLFRFIWT SFMNITCCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.2	4e-41	G2-like family protein