PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM69988.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 285aa MW: 32652.7 Da PI: 9.2961 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.6 | 2.5e-07 | 26 | 71 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 rWT eE +++ +a + + ++ +W Ia +++ g+++ ++ +++ OWM69988.1 26 RWTREENKQFERALAVFDKEtpdRWVNIALMIP-GKSPLDVMTKYRE 71 9*****************99*************.********99986 PP | |||||||
2 | Myb_DNA-binding | 42.5 | 1.5e-13 | 124 | 168 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++++ ++G+g+W+ I+r +t+ q+ s+ qky OWM69988.1 124 PWTEEEHRRFLQGLLKYGKGDWRNISRNYVVSKTPTQVASHAQKY 168 7*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MELETFFQNT HFSINSGDWL LTPSTRWTRE ENKQFERALA VFDKETPDRW VNIALMIPGK 60 SPLDVMTKYR ELEEDLIEIE AGRVPIPWYF GPSLTLEGRD YDGLRKKGSA AGRVSDQERK 120 KGIPWTEEEH RRFLQGLLKY GKGDWRNISR NYVVSKTPTQ VASHAQKYFI RQQLSSNSNS 180 KDNRRRPSIH DITTRNLTDS SLPLSENNLD IIANDCNNSS STRPLSEQKP NFCSTRPSSG 240 LCDVAPSGLR LQEKDLRLGA FRGFGIKPSS NPLFEVQSTM YRIYG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11280.1 | 4e-71 | MYB family protein |