PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69939.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 267aa    MW: 29039.9 Da    PI: 9.116
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.8e-1282128354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+ +E+rRRdriN  +  Lr+l+Pk+      K++Ka+ L ++++ +k+L
  OWM69939.1  82 KSHSLAEKRRRDRINAQLTSLRKLIPKS-----DKMDKAALLGRVIDQVKDL 128
                 79*************************8.....7************999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MDSRLMSSSA WWAEGADRWV PHSDDVLPDG ESCSVVPASL PMSSSSDASK LSRFPGVQSS  60
WAAPVDGFAE DSGTRTPSSA SKSHSLAEKR RRDRINAQLT SLRKLIPKSD KMDKAALLGR  120
VIDQVKDLKR KASEISKTSL VPTETDEVNI DLEVPESASS DNIGGNSSSS VFIRASVCCD  180
DRPELFGELV RVLRGMRLTM VKADMTSVGG RIRSILVLCS KDGEEGFCVS SLKQSLRTVL  240
SRIASSASMA SSYRSIRSKR QRFFLPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.14e-43bHLH family protein