PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM69934.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 132aa MW: 14202.1 Da PI: 9.45 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 70.6 | 3.2e-22 | 14 | 82 | 1 | 77 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGav 77 +C aCk+l+r+Ca++C++a+ fa vhk+FGasnv+k+l ++pee+red+++sl+y+Aear+ dP a OWM69934.1 14 SCTACKLLKRRCAPSCIFAQQ--------FAKVHKVFGASNVSKILGEVPEEQREDTVNSLAYKAEARLWDPSTAAQ 82 6*****************987........999****************************************98765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 132 aa Download sequence |
MPQRSGHEVR SSSSCTACKL LKRRCAPSCI FAQQFAKVHK VFGASNVSKI LGEVPEEQRE 60 DTVNSLAYKA EARLWDPSTA AQGPSPYCSG RWPSSSTTLP LPGPASPGSR PQQWLRAQSG 120 PPEGSSIMTT PM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G11090.1 | 2e-37 | LBD family protein |