PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69746.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 339aa MW: 37576.4 Da PI: 8.115

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69746.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.9	5.4e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd llv +++++G+g+Wk+++ + g+ R+ k+c++rw +yl OWM69746.1 14 KGPWTPEEDILLVSYIQEHGPGNWKSVPTHTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	45.7	1.5e-14	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l OWM69746.1 67 RGDFTDHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNFWNTHL 112 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MGRPPCCDKA GVKKGPWTPE EDILLVSYIQ EHGPGNWKSV PTHTGLLRCS KSCRLRWTNY 60 LRPGIKRGDF TDHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNFWNT HLKKKLGKLQ 120 SPSGSDDALA SNSKTMSTRD RWERRLQADI QTAKQALSEA LSPEKQDLIS DLRTFSVIAP 180 KKPAQAPTYA SSTENIARLL KGWTKKSLPR PTRPIPSDPA ARRASGSKDG SESSFSEGTL 240 STTAAANCYK SETEVLSCSG GLEPFLGLEP FGPTSSSDFS NSASGEMSPN YLQNETKPGP 300 SLLEQLPWSL LEKWLFDESL YGKDLQLSEL LLDEDANFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28910.1	1e-102	MYB family protein