PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69546.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

AP2

Protein Properties

Length: 362aa MW: 40331.3 Da PI: 8.0761

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.4	3.2e-12	61	116	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g OWM69546.1 61 IHRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEEAAAHAYDLAALKYWG 116 68****************99998898888888******************98 PP
2	AP2	51.2	3.1e-16	159	210	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OWM69546.1 159 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 210 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MAKTSQQNYH SKNRQAPSSK DGHGNGNGND SGSGGVKPAV TKVKRTRKSV PRESPLQRSS 60 IHRGVTRHRW TGRYEAHLWD KNCWNESQNK KGRQGAYDDE EAAAHAYDLA ALKYWGPETI 120 LNFPLSTYQE ELTEMEGQSR EEYIGSLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV 180 FGNKYLYLGT YATQEEAATA YDMAAIEYRG LNAVTNFDLS RYIKWLRPSN QSINPNFSQA 240 SPNSEAGALP NPIPELGFSL LTSAYQQNGE NKAPTSRPDG SASSALGLLL QSTKFKEMLE 300 RTSAQDSPST PPESDLPRRS FPDDIQTYFD CQESSGFGEG DDSIFGDLNS FASPMFNCEL 360 ES

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MAKTSQQNYH SKNRQAPSSK DGHGNGNGND SGSGGVKPAV TKVKRTRKSV PRESPLQRSS  60
IHRGVTRHRW TGRYEAHLWD KNCWNESQNK KGRQGAYDDE EAAAHAYDLA ALKYWGPETI  120
LNFPLSTYQE ELTEMEGQSR EEYIGSLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV  180
FGNKYLYLGT YATQEEAATA YDMAAIEYRG LNAVTNFDLS RYIKWLRPSN QSINPNFSQA  240
SPNSEAGALP NPIPELGFSL LTSAYQQNGE NKAPTSRPDG SASSALGLLL QSTKFKEMLE  300
RTSAQDSPST PPESDLPRRS FPDDIQTYFD CQESSGFGEG DDSIFGDLNS FASPMFNCEL  360
ES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-107	AP2 family protein