PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM69054.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | YABBY | ||||||||
Protein Properties | Length: 209aa MW: 23370.5 Da PI: 8.7677 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 239 | 1e-73 | 2 | 175 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslk....eelleelkveeenlksnvekees.asts 95 ++ +se+vCyvqCnfCntilavsvP +s+++vvtvrCGhC++ll+vn+a as + ++l+++ + eel++ + +++++++n+ ++++ +s+ OWM69054.1 2 SLEMASERVCYVQCNFCNTILAVSVPCSSMYTVVTVRCGHCANLLTVNMAGASLQPLPLQELQKQQHligpEELMKGSGPSSSKCNTNNNTHNKcTSSL 100 67789*********************************************9995544444455543311224588888888888877766555404455 PP YABBY 96 vsseklsenedeev.prvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +s+ + ++++d+ pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl OWM69054.1 101 ESAPHHQQQQDQPPpPRIPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 175 55555444444444145555.9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MSLEMASERV CYVQCNFCNT ILAVSVPCSS MYTVVTVRCG HCANLLTVNM AGASLQPLPL 60 QELQKQQHLI GPEELMKGSG PSSSKCNTNN NTHNKCTSSL ESAPHHQQQQ DQPPPPRIPP 120 IRPPEKRQRV PSAYNRFIKE EIQRIKASNP DISHREAFST AAKNWAHFPH IHFGLKLEGN 180 MNKQSKLDHH SSINGGDHHL HPKTSHGFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 3e-42 | YABBY family protein |