PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69025.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 405aa MW: 44696 Da PI: 6.4154

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	155.6	2.1e-48	18	142	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 pGfrF+Ptdeel+++yL+kk+eg + ++ evi+e++i+++ePwdLp k+v ++ +ew+fFs r +ky++g++++rat+ gyWkatgk+++v+s ++++ OWM69025.1 18 FPGFRFSPTDEELISYYLRKKMEGCEKSV-EVISEIEICRHEPWDLPgKSVIQSPNEWFFFSARGRKYPNGSQSRRATELGYWKATGKERNVKS-GNNV 114 59**********************999.99***********767777889***********************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyr 127 +g+k+tLvf+ grapkge+t+W+mhey OWM69025.1 115 IGTKRTLVFHLGRAPKGERTEWIMHEYC 142 ***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MAGPSQETQI SIAASSSFPG FRFSPTDEEL ISYYLRKKME GCEKSVEVIS EIEICRHEPW 60 DLPGKSVIQS PNEWFFFSAR GRKYPNGSQS RRATELGYWK ATGKERNVKS GNNVIGTKRT 120 LVFHLGRAPK GERTEWIMHE YCTHGKSQDA PVVCRLRRNT EFRLNDASNR GSATQRQATD 180 MGNPDHLGSE GVTDQMGISE GDKTLTGPQA RWTSSSYDSH SVEQLDSTSE SREKLLNEGA 240 QAASSSHKKD SDEDEDFYAD ILKDDIIKLD ESAVSATPNV LMMEKSRLEG ERASQQSLLA 300 LTPTDPIPCG VNRRVKFNEP GLETQLPGSA SIAGAMDSLW IDGNDKDYNA GKDKGSSQSS 360 LWYPSCLVTT IFAGKTVRQR VWAMMAVVAL VLLAVFLMGR SGKSG

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MAGPSQETQI SIAASSSFPG FRFSPTDEEL ISYYLRKKME GCEKSVEVIS EIEICRHEPW  60
DLPGKSVIQS PNEWFFFSAR GRKYPNGSQS RRATELGYWK ATGKERNVKS GNNVIGTKRT  120
LVFHLGRAPK GERTEWIMHE YCTHGKSQDA PVVCRLRRNT EFRLNDASNR GSATQRQATD  180
MGNPDHLGSE GVTDQMGISE GDKTLTGPQA RWTSSSYDSH SVEQLDSTSE SREKLLNEGA  240
QAASSSHKKD SDEDEDFYAD ILKDDIIKLD ESAVSATPNV LMMEKSRLEG ERASQQSLLA  300
LTPTDPIPCG VNRRVKFNEP GLETQLPGSA SIAGAMDSLW IDGNDKDYNA GKDKGSSQSS  360
LWYPSCLVTT IFAGKTVRQR VWAMMAVVAL VLLAVFLMGR SGKSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	5e-81	NAC family protein