PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68966.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 495aa MW: 53614.8 Da PI: 6.9661

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	7e-05	470	492	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+ksF++ L++H + H OWM68966.1 470 SCKSCNKSFNSENALQSHSKAkH 492 7*****************88767 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MPNSKTSHRR GQEAWKDQSR RGRSTEKASS FHGRYPVAME EAKQLRRPRT LPDLRSTAAS 60 IKPSSSGASV AAEERPRLTK LLLNVTIQGS LGPVQVVMTQ DSSVADLIAT AMRQYVKEGR 120 RPVLRSADPA GFDLHYSQFS LESLGRDEKL MTLGSRNFFL CPRKPPAAET DGATATPAAS 180 CSKEAEKATK TGSNWLKFMA FLLASSRPLG PSLSLRRLSM ALPMEFWGVE VKAGQPLKVV 240 PGEAKILHLS QASLGESKNS KSSDSVPLFV NFDGQKLVLG TLSPDKFPQL AFDLVFEKEF 300 ELSHNWKHGK DESDEEDIPL ITAENGKGGS EASAKHSTAN AIAAKPESSA KPKVRIVEPM 360 KVDGEDSDED DDEDEEDEDD EEGSDDSEAE SDEEDSDEEE TPKKAEQGKK RPAESAPKTP 420 VSDKKAKVVA SQKTDGKKGG HTATPHPAKH AGKTPANAKQ QTPKSDGKIS CKSCNKSFNS 480 ENALQSHSKA KHGAK

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MPNSKTSHRR GQEAWKDQSR RGRSTEKASS FHGRYPVAME EAKQLRRPRT LPDLRSTAAS  60
IKPSSSGASV AAEERPRLTK LLLNVTIQGS LGPVQVVMTQ DSSVADLIAT AMRQYVKEGR  120
RPVLRSADPA GFDLHYSQFS LESLGRDEKL MTLGSRNFFL CPRKPPAAET DGATATPAAS  180
CSKEAEKATK TGSNWLKFMA FLLASSRPLG PSLSLRRLSM ALPMEFWGVE VKAGQPLKVV  240
PGEAKILHLS QASLGESKNS KSSDSVPLFV NFDGQKLVLG TLSPDKFPQL AFDLVFEKEF  300
ELSHNWKHGK DESDEEDIPL ITAENGKGGS EASAKHSTAN AIAAKPESSA KPKVRIVEPM  360
KVDGEDSDED DDEDEEDEDD EEGSDDSEAE SDEEDSDEEE TPKKAEQGKK RPAESAPKTP  420
VSDKKAKVVA SQKTDGKKGG HTATPHPAKH AGKTPANAKQ QTPKSDGKIS CKSCNKSFNS  480
ENALQSHSKA KHGAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44750.2	4e-29	C2H2 family protein