PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68794.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 583aa    MW: 66211.3 Da    PI: 8.7499
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS303.93.7e-932525821331
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshlta 98 
                 l++lL+ cAeavs ++ + a++lLa++++ +sp gd +qRla+yf+++L+ar +    +++++  p  +s k    + l ++++ + + P+ k++    
  OWM68794.1 252 LRNLLILCAEAVSGNEYRTANQLLAQIRQYSSPMGDGVQRLAHYFAKGLEARFSA---RVVQQPDPYIKSMKVpINDLLRFYQTIFLAHPFCKIAISFV 347
                 6899*************************************************99...55555544433333349999********************* PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 N+ I + +e+++++ ++Df+i++G+QWp L+q L+ Rp+g p+lRiTg+++p+ g    e++eetg  L k++++lgvpfe++ +v++++e+++++eL+
  OWM68794.1 348 NNLIAKVAEKAKTLRVVDFGIMYGFQWPQLIQLLSRRPGGRPKLRITGIEKPQLGfrPLERIEETGTHLVKYCKRLGVPFEYQGIVSHNWETIKINELK 446
                 *****************************************************99999***************************************** PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 ++++E+laVn+ ++ ++lld + + +++rd+vL+l+++++P+v+v +  + ++ns+ F++rf e+l++ salfd++++++pr+s er+++E+ +  r++
  OWM68794.1 447 LNRNEVLAVNCLFRFKNLLDGTIAENNPRDAVLQLIQEMKPDVFVQSIVNGSYNSPFFMTRFKETLYHLSALFDMMDVNVPRDSPERMFIEEGYYIRRA 545
                 *************************************************************************************************** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplse 331
                  nv++ceg+er+er et+++W++r+ +aGF++vpl++
  OWM68794.1 546 INVISCEGTERFERPETYKQWQNRVAKAGFRQVPLGS 582
                 **********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 583 aa     Download sequence    
MPFSLSFPNP SPPSNSFSRT RGLVSSSTSS FREAELSSKL DDDDFSKPVL KYIDQVLMEE  60
SSEERLSLSH DLFALRATEK SLHDVIATDI TLNSSSAVRN NSNSLVSHGN YRPLFPNTSE  120
RSGSWPSSGS SLISFAKRAD GDVVGTSADE FTIQYPSNSH ESGLHFWRDP DDDAHKFLSQ  180
SIKLIVATEQ RSWLEKFNVV VNRNAVTLCY EDGNMLPHLP GDDRGLEPVG QFRGSRVCAK  240
KQDKKKEHAV DLRNLLILCA EAVSGNEYRT ANQLLAQIRQ YSSPMGDGVQ RLAHYFAKGL  300
EARFSARVVQ QPDPYIKSMK VPINDLLRFY QTIFLAHPFC KIAISFVNNL IAKVAEKAKT  360
LRVVDFGIMY GFQWPQLIQL LSRRPGGRPK LRITGIEKPQ LGFRPLERIE ETGTHLVKYC  420
KRLGVPFEYQ GIVSHNWETI KINELKLNRN EVLAVNCLFR FKNLLDGTIA ENNPRDAVLQ  480
LIQEMKPDVF VQSIVNGSYN SPFFMTRFKE TLYHLSALFD MMDVNVPRDS PERMFIEEGY  540
YIRRAINVIS CEGTERFERP ETYKQWQNRV AKAGFRQVPL GSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-126GRAS family protein