PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68641.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 581aa MW: 64120.9 Da PI: 6.2797

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.7e-13	429	475	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq OWM68641.1 429 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 475 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MKMEVGVGMA GELWDNDEER AMVAAVLGTR AFDYLISSSL SNENLLMGVG SNENLQNRLS 60 DLVDRPNASG FSWNYAIFWQ ISQSKSGDLV LGWGDGCCRE PRDGEESEAT RIINSKFEED 120 GTQQSMRKKV LQKLHTLFGG LEEDSYALQL DRVTNTELLF LASMYFSFPR GEGGPGKCFA 180 SRVHIWFTDA LGSGYECCVR SSLMKSAGMQ TILWVPADAG VVELGSVRFV PESLELLQSI 240 RSSFSLNSSV LPRINGVKQA NGETNPKIFG QDLSLMHSGR AQFREKLPIR KMEEKQPREV 300 HPNGVGLAFP SPRNGKRPSS WNFVHDVKQG NSVGPYGPQP RVENSLPPIN GARVDSWLEH 360 CKSQNWTQMQ IDFSGATSRS SATARPLSTE AEHSDAEASC KEERAGAVDD SRPRKRGRKP 420 ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAIAY INELQARLRT 480 MEAERDNYVS TSSNSGPKSG PEVDVQAARD EIIVRVTSPV DSDPASQVIQ AFKDAQISVI 540 ESKIAAANDT VFHTFVVKSQ GGEPLTKEKL IEAISRESSS S

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MKMEVGVGMA GELWDNDEER AMVAAVLGTR AFDYLISSSL SNENLLMGVG SNENLQNRLS  60
DLVDRPNASG FSWNYAIFWQ ISQSKSGDLV LGWGDGCCRE PRDGEESEAT RIINSKFEED  120
GTQQSMRKKV LQKLHTLFGG LEEDSYALQL DRVTNTELLF LASMYFSFPR GEGGPGKCFA  180
SRVHIWFTDA LGSGYECCVR SSLMKSAGMQ TILWVPADAG VVELGSVRFV PESLELLQSI  240
RSSFSLNSSV LPRINGVKQA NGETNPKIFG QDLSLMHSGR AQFREKLPIR KMEEKQPREV  300
HPNGVGLAFP SPRNGKRPSS WNFVHDVKQG NSVGPYGPQP RVENSLPPIN GARVDSWLEH  360
CKSQNWTQMQ IDFSGATSRS SATARPLSTE AEHSDAEASC KEERAGAVDD SRPRKRGRKP  420
ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAIAY INELQARLRT  480
MEAERDNYVS TSSNSGPKSG PEVDVQAARD EIIVRVTSPV DSDPASQVIQ AFKDAQISVI  540
ESKIAAANDT VFHTFVVKSQ GGEPLTKEKL IEAISRESSS S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-180	bHLH family protein